Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Allopatric and sympatric diversification within roach (Rutilus rutilus) of large prealpine lakes

PROVIDER: PRJNA533015 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8904870.fastq.gz	Fastqsanger.gz
	SRR8904880.fastq.gz	Fastqsanger.gz
	SRR8904890.fastq.gz	Fastqsanger.gz
	SRR8904900.fastq.gz	Fastqsanger.gz
	SRR8904910.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 92

Similar Datasets

fRutRut

Project description:Rutilus rutilus (roach minnow)

| PRJEB61621 | ENA

fRutRut2

Project description:Rutilus rutilus (roach minnow) genome assembly, fRutRut2

| PRJEB62672 | ENA

fRutRut

Project description:Rutilus rutilus (roach minnow), genomic and transcriptomic data

| PRJEB61620 | ENA

fRutRut2 alternate haplotype

Project description:Rutilus rutilus (roach minnow) genome assembly, fRutRut2, alternate haplotype

| PRJEB62671 | ENA

Genetic sex marker in roach

Project description:Identification of a genetic sex marker in the roach (Rutilus rutilus) using RAD sequencing.

| PRJEB26657 | ENA

Project description:Large-scale identification of pathogen essential genes during co-infection with sympatric and allopatric microbes

| PRJNA540913 | ENA

Rutilus rutilus

Project description:Can roach, Rutilus rutilus, adapt to the harmful effects of oestrogen exposure from waste water treatment work effluents?

| PRJNA295813 | ENA

Evolution of gene expression during an adaptive diversification event

Project description:During a 1,000 generations evolution experiment, two types of bacteria (S and L) repeatedly diverged from a common ancestor (A) in a fully sympatric seasonal environment containing glucose and acetate. We compare the transcription profile of the two derived types and the common ancestor in order to investigate the metabolic modifications associated with this adaptive diversification event. Keywords: time point, experimental evolution

2007-12-15 | GSE8965 | GEO

Lausannevirus one year microevolution

Project description:Lausannevirus one year genome evolution in allopatric versus sympatric conditions

| PRJEB20258 | ENA

Biogeography shaped the metabolome of the genus Espeletia: a phytochemical perspective on an Andean adaptive radiation

Project description:The páramo ecosystem has the highest rate of diversification across plant lineages on earth, of which the genus Espeletia (Asteraceae) is a prime example. The current distribution and molecular phylogeny of Espeletia suggest the influence of Andean geography and past climatic fluctuations on the diversification of this genus. However, molecular markers have failed to reveal subtle biogeographical trends in Espeletia diversification, and metabolomic evidence for allopatric segregation in plants has never been reported. Here, we present for the first time a metabolomics approach based on liquid chromatography-mass spectrometry for revealing subtle biogeographical trends in Espeletia diversification. We demonstrate that Espeletia lineages can be distinguished by means of different metabolic fingerprints correlated to the country of origin on a global scale and to the páramo massif on a regional scale. Distinctive patterns in the accumulation of secondary metabolites according to the main diversification centers of Espeletia are also identified and a comprehensive phytochemical characterization is reported. These findings demonstrate that a variation in the metabolic fingerprints of Espeletia lineages followed the biogeography of this genus, suggesting that our untargeted metabolomics approach can be potentially used as a model to understand the biogeographic history of additional plant groups in the páramo ecosystem.

2018-11-20 | MTBLS445 | MetaboLights

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data