Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Population genetic variation in four grasshoppers along an elevational gradient

PROVIDER: PRJNA547722 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9216863.fastq.gz	Fastqsanger.gz
	SRR9216864.fastq.gz	Fastqsanger.gz
	SRR9216865.fastq.gz	Fastqsanger.gz
	SRR9216866.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Temperature and livestock grazing trigger transcriptome responses in bumblebees along an elevational gradient

Project description:It is assumed that climate and land-use changes cause increasing stress to pollinators, which play pivotal roles in almost all terrestrial ecosystems, with consequences on population growth, diversity and ecosystem functions. While these responses to global change drivers are well located, the molecular pathways triggering the response are poorly understood. We analysed the transcriptomic response of Bombus lucorum workers in their systematic responses to temperature and livestock grazing, sampled along an elevational gradient from 650 – 1930 m.a.s.l., and from differently managed grassland sites (livestock grazing vs. unmanaged) in and around the National Park Berchtesgaden (German Alps).

2022-09-14 | GSE198931 | GEO

Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M 2)

Project description:Copy number variants (CNVs) represent a substantial source of genomic variation in vertebrates, but the zebrafish reference genome has no annotated CNV information. We developed a zebrafish CNV map using 80 zebrafish genomes from laboratory strains (AB, Tubingen, and WIK) and one native population, identifying 6,080 CNV elements. Overlapping or adjacent CNVs account for 14.6% of the genome, representing four times the CNV levels from other vertebrates including humans. Highest intra-specific CNV levels were observed for Tubingen, a common laboratory strain due to high fecundity. Tubingen variation likely represents higher initial population size and composite population founders initiating the laboratory strain. Extensive zebrafish CNVs, along with associated phenotypic impacts, advocates for increased usage of isogenic strains for genetic studies intended for human disease translation.

2011-12-27 | GSE28278 | GEO

Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M)

2011-12-27 | GSE28276 | GEO

Project description:Biological soil crust communities along an elevational gradient in Reynolds Creek CZO

| PRJNA633217 | ENA

Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (expression array)

2011-12-27 | GSE28239 | GEO

Temperature and livestock grazing trigger transcriptome responses in bumblebees along an elevational gradient

Project description:Temperature and livestock grazing trigger transcriptome responses in bumblebees along an elevational gradient

| PRJNA817522 | ENA

Arbuscular mycorrhizal fungi in the Himalayas

Project description:Plant-symbiotic fungal diversity tracks variation in vegetation and the abiotic environment along an extended elevational gradient in the Himalayas

| PRJEB64855 | ENA

Project description:Evaluating the Roles of Drift and Selection in Trait Loss along an Elevational Gradient

| PRJNA1246133 | ENA

archaeal community

Project description:Characterization of archaeal community in activated sludge bioreactors along an elevational gradient in China

| PRJEB9052 | ENA

Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M 2)

2011-12-27 | E-GEOD-28278 | biostudies-arrayexpress