Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Lysmata amboinensis whole body mRNA sequencing

PROVIDER: PRJNA548450 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9277361_1.fastq.gz	Fastqsanger.gz
	SRR9277361_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Macropygia amboinensis

Project description:Macropygia amboinensis

| PRJNA960419 | ENA

Transcriptome sequencing of the halictid, Lasioglossum albipes

Project description:Deep sequencing of mRNA from the halictid Part of the Lasioglossum albipes WGS project (BioProject ID: PRJNA174755) Analysis of ploy(A)+ RNA of different specimens:whole body from the halictid (Lasioglossum albipes)

2012-10-02 | E-GEOD-41247 | biostudies-arrayexpress

whole body

Project description:whole body

| PRJNA87987 | ENA

Cuora amboinensis

Project description:Cuora amboinensis overview

| PRJNA511139 | ENA

Toxorhynchites amboinensis

Project description:Toxorhynchites amboinensis overview

| PRJNA1211219 | ENA

Project description:Amphiprion percula whole body sequencing

| PRJNA1280023 | ENA

Cuora amboinensis

Project description:Cuora amboinensis Genome sequencing and assembly

| PRJNA511034 | ENA

Alisterus amboinensis

Project description:Alisterus amboinensis Genome sequencing and assembly

| PRJNA703487 | ENA

The IkB kinase complex is a regulator of mRNA stability

Project description:The IkB kinase (IKK) is considered to control gene expression primarily through activation of the transcription factor NF-kB. However, we show here that IKK additionally regulates gene expression on post-transcriptional level. IKK interacted with several mRNA binding proteins, including a (P)-body scaffold protein, termed Enhancer of Decapping 4 (EDC4). IKK bound to and phosphorylated EDC4 in a stimulus-sensitive manner, leading to co-recruitment of P-body components, mRNA Decapping Proteins 1a and 2 (DCP1a and DCP2) and to an increase in P-body numbers. Using RNA sequencing, we identified scores of transcripts whose stability was regulated via the IKK-EDC4 axis. Strikingly, in the absence of stimulus IKK-EDC4 promoted destabilization of pro-inflammatory cytokines and regulators of apoptosis. Our findings expand the reach of IKK beyond its canonical role as a regulator of transcription.

| MSV000082890 | MassIVE

RNA-sequencing of livers in wt and sirt6-tg mice

Project description:Whole body SIRT6 overexpression (SIRT6-tg) extends lifespan. Here we examine the effect of SIRT6 overexpression on liver mRNA profile

2021-03-14 | GSE157838 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data