Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Mycosphere soil Bacterial of Russula griseocarnosa

PROVIDER: PRJNA553654 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9665270_1.fastq.gz	Fastqsanger.gz
	SRR9665270_2.fastq.gz	Fastqsanger.gz
	SRR9665280_1.fastq.gz	Fastqsanger.gz
	SRR9665280_2.fastq.gz	Fastqsanger.gz
	SRR9665290_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 160

Similar Datasets

Project description:Soil metagenome of Russula griseocarnosa

| PRJNA1211853 | ENA

Project description:Soil fungal community of Russula griseocarnosa

| PRJNA1212833 | ENA

Russula griseocarnosa

Project description:Russula griseocarnosa overview

| PRJNA591686 | ENA

Russula griseocarnosa

Project description:Russula griseocarnosa Transcriptome or Gene expression

| PRJNA513242 | ENA

Russula griseocarnosa

Project description:Russula griseocarnosa Genome sequencing and assembly

| PRJNA479704 | ENA

Russula griseocarnosa strain:E138

Project description:Genome sequencing of Russula griseocarnosa Isolated from fruiting body E138

| PRJNA719232 | ENA

Project description:Selection of five ectomycorrhizal fungi Mycosphere soil bacterial communities

| PRJNA1121956 | ENA

Mycelial nutrient transfer promotes bacterial co-metabolic organochlorine pesticide degradation in nutrient-deprived environments

Project description:Biotransformation of soil organochlorine pesticides (OCP) is often impeded by a lack of nutrients relevant for bacterial growth and/or co-metabolic OCP biotransformation. By providing space-filling mycelia, fungi promote contaminant biodegradation by facilitating bacterial dispersal and the mobilization and release of nutrients in the mycosphere. We here tested whether mycelial nutrient transfer from nutrient-rich to nutrient-deprived areas facilitates bacterial OCP degradation in a nutrient-deficient habitat. The legacy pesticide hexachlorocyclohexane (HCH), a non-HCH-degrading fungus (Fusarium equiseti K3), and a co-metabolically HCH-degrading bacterium (Sphingobium sp. S8) isolated from the same HCH-contaminated soil were used in spatially structured model ecosystems. Using 13C-labelled fungal biomass and protein-based stable isotope probing (protein-SIP), we traced the incorporation of 13C fungal metabolites into bacterial proteins while simultaneously determining the biotransformation of the HCH isomers. The relative isotope abundance (RIA, 7.1 – 14.2%), labeling ratio (LR, 0.13 – 0.35), and the shape of isotopic mass distribution profiles of bacterial peptides indicated the transfer of 13C-labeled fungal metabolites into bacterial proteins. Distinct 13C incorporation into the haloalkane dehalogenase (linB) and 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (LinC), as key enzymes in metabolic HCH degradation, underpin the role of mycelial nutrient transport and fungal-bacterial interactions for co-metabolic bacterial HCH degradation in heterogeneous habitats. Nutrient uptake from mycelia increased HCH removal by twofold as compared to bacterial monocultures. Fungal-bacterial interactions hence may play an important role in the co-metabolic biotransformation of OCP or recalcitrant micropollutants (MPs).

2023-02-24 | PXD038571 | Pride

the bacterial microbiota of fruitbodies and mycosphere soil

Project description:the bacterial microbiota of fruitbodies and mycosphere soil Raw sequence reads

| PRJNA861703 | ENA

soil metagenome

Project description:Mycosphere microbiome of Rosellinia necatrix in soil

| PRJDB18267 | ENA