Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Abscondita terminalis isolate:Ate-2015

ABSTRACT: Genomic and experimental data provide new insights into luciferin biosynthesis and bioluminescence evolution of fireflies

PROVIDER: PRJNA556938 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9897460_subreads.fastq.gz	Fastqsanger.gz
	SRR9897470_1.fastq.gz	Fastqsanger.gz
	SRR9897470_2.fastq.gz	Fastqsanger.gz
	SRR9897480_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 83

Similar Datasets

Lamprigera yunnana isolate:Lyu-2014

Project description:Genomic and experimental data provide new insights into luciferin biosynthesis and bioluminescence evolution of fireflies

| PRJNA556754 | ENA

Firefly genomes illuminate parallel origins of bioluminescence in beetles

Project description:Fireflies and their fascinating luminous courtships have inspired centuries of scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary origin of their bioluminescence remains unclear. To shed light on this long-standing question, we sequenced the genomes of two firefly species that diverged over 100 million-years-ago: the North American Photinus pyralis and Japanese Aquatica lateralis. To compare bioluminescent origins, we also sequenced the genome of a related click-beetle, the Caribbean Ignelater luminosus, with bioluminescent biochemistry near-identical to fireflies, but anatomically unique light organs, suggesting the intriguing but contentious hypothesis of parallel gains of bioluminescence. Our analyses support two independent gains of bioluminescence between fireflies and click-beetles, and provide new insights into the genes, chemical defenses, and symbionts that evolved alongside their luminous lifestyle.

2018-03-22 | GSE107177 | GEO

Firefly genomes illuminate parallel origins of bioluminescence in beetles

Project description:Fireflies and their luminous courtships have inspired centuries of scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary origin of bioluminescence within beetles remains unclear. To shed light on this long-standing question, we sequenced the genomes of two firefly species that diverged over 100 million-years-ago: the North American Photinus pyralis and Japanese Aquatica lateralis. To compare bioluminescent origins, we also sequenced the genome of a related click beetle, the Caribbean Ignelater luminosus, with bioluminescent biochemistry near-identical to fireflies, but anatomically unique light organs, suggesting the intriguing hypothesis of parallel gains of bioluminescence. Our analyses support independent gains of bioluminescence in fireflies and click beetles, and provide new insights into the genes, chemical defenses, and symbionts that evolved alongside their luminous lifestyle.

2018-09-14 | MTBLS698 | MetaboLights

Transcriptome aequencing of Pyrocoelia pectoralis

Project description:The intriguing reaction of bioluminescence in the fireflies depends on the luciferin metabolism in luminous organs

2025-12-31 | GSE290780 | GEO

Abscondita terminalis

Project description:Abscondita terminalis overview

| PRJNA613760 | ENA

Abscondita terminalis

Project description:Abscondita terminalis Proteome

| PRJNA560137 | ENA

Project description:Lucibufagin toxins evolved within fireflies after the origin of bioluminescence

| PRJNA906471 | ENA

Arabidopsis thaliana in altered gravity: WS in C-9 parabolic flight, 2015

Project description:The increasing availability of flights on suborbital rockets creates new avenues for the study of spaceflight effects on biological systems, in particular the transitions between hypergravity and microgravity. This paper presents an initial comparison of the responses of Arabidopsis thaliana to suborbital and atmospheric parabolic flights as an important step toward characterizing these emerging suborbital platforms and their effects on biology. Transcriptomic profiling of the response of the Arabidopsis ecotype Wassilewskija (WS) to the aggregate spaceflight experiences in the Blue Origin New Shepard and Virgin Galactic SpaceShipTwo rockets revealed that the transcriptomic load induced by flight differed greatly between the two flights, yet was biologically related to traditional parabolic flight responses. The sku5 skewing mutant and 14-3-3κ:GFP regulatory protein overexpression lines each showed altered intra-platform responses compared to WS in the Blue Origin and parabolic flights, respectively. An additional parabolic flight using the F-104 Starfighter showed that the response of 14-3-3κ:GFP to flight was modulated in a similar manner to the WS line. Despite the differing genotypes, experimental workflows, flight profiles and platforms, alteration of gene expression remodeling central metabolic processes was commonly observed as a response to the flights. The processes included carbon and nitrogen metabolism, branched-chain amino acid degradation, and hypoxic responses. The timing and directionality of differentially-expressed genes involved in the conserved pathways differed among the platforms. The data presented herein highlight the potential for various suborbital platforms to contribute insights into biological responses to spaceflight, and further suggest that in-flight fixation during suborbital experiments will provide insights into responses to each phase of flight.

2021-04-01 | GSE159864 | GEO