Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rheinheimera tangshanensis strain:JA3-B52

ABSTRACT: Rheinheimera tangshanensis strain:JA3-B52 Genome sequencing and assembly

PROVIDER: PRJNA559782 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Erysipelothrix rhusiopathiae strain:B52

Project description:Erysipelothrix rhusiopathiae strain:B52 Genome sequencing and assembly

| PRJNA750613 | ENA

Halorubrum sp. B52

Project description:Halorubrum sp. B52 Genome sequencing

| PRJNA377838 | ENA

Rheinheimera salexigens strain:KH87

Project description:Rheinheimera salexigens strain:KH87 Genome sequencing and assembly

| PRJNA344372 | ENA

Rheinheimera metallidurans strain:DCL_24

Project description:Rheinheimera metallidurans strain:DCL_24 Genome sequencing and assembly

| PRJNA814840 | ENA

Rheinheimera faecalis strain:YR1

Project description:Rheinheimera faecalis strain:YR1 Genome sequencing and assembly

| PRJNA786411 | ENA

Rheinheimera mesophila strain:IITR13

Project description:Rheinheimera mesophila strain:IITR13 Genome sequencing and assembly

| PRJNA507505 | ENA

Rheinheimera pleomorphica strain:PKS7

Project description:Rheinheimera pleomorphica strain:PKS7 Genome sequencing and assembly

| PRJNA522974 | ENA

Rheinheimera riviphila strain:KYPC3

Project description:Rheinheimera riviphila strain:KYPC3 Genome sequencing and assembly

| PRJNA512510 | ENA

Rheinheimera aquimaris strain:IOP_21

Project description:Rheinheimera aquimaris strain:IOP_21 Genome sequencing and assembly

| PRJNA758777 | ENA

Identification of B52 potential mRNA targets

Project description:Deciphering the role of alternative splicing in developmental processes relies on the identification of key genes whose expression is controlled by splicing regulators throughout growth of a whole organism. Targeting expression of five SR proteins in the developing eye of Drosophila allowed us to show that these splicing factors induce various phenotypic alterations concerning eye organogenesis and viability. Although both dASF/SF2 and B52 caused defects in ommatidia structure, only B52 impairs normal photoreceptor axons projection and neurogenesis in visual ganglia. Consistently, microarray analyses revealed that many of the B52 targets are involved in brain organogenesis and we show that their splicing profile is altered both in B52 loss and gain of function. Conversely, a large proportion of dASF/SF2 targets are involved in eye development. This differential effect argues that SR proteins confer accuracy to developmental gene-expression programs, thus ensuring tissue identity and supporting cell-lineage decisions. Keywords: genetic modification

2007-09-18 | GSE5858 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data