Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Structural and Functional Responses of Soil Microbial Communities to Biodegradable Plastic Film Mulching in Two Agroecosystems

PROVIDER: PRJNA564156 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10076400_1.fastq.gz	Fastqsanger.gz
	SRR10076400_2.fastq.gz	Fastqsanger.gz
	SRR10076500_1.fastq.gz	Fastqsanger.gz
	SRR10076500_2.fastq.gz	Fastqsanger.gz
	SRR10076401_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 336

Similar Datasets

Project description:Plastic film mulching affect functional microbes.

| PRJNA630145 | ENA

Project description:Plastic film mulching affect functional microbes.

| PRJNA645247 | ENA

Multiomics study to elucidate the biodegradation of copolyester film by a marine microbial enrichment culture

Project description:Although the biodegradation of biodegradable plastics in soil and compost is well-studied, there is little knowledge on the metabolic mechanisms of synthetic polymers degradation by marine microorganisms. Here, we present a multiomics study to elucidate the biodegradation mechanism of a commercial aromatic-aliphatic copolyester film by a marine microbial enrichment culture. The plastic film and each monomer can be used as sole carbon source. Our analysis showed that the consortium synergistically degrades the polymer, different degradation steps being performed by different members of the community. Analysis of gene expression and translation profiles revealed that the relevant degradation processes in the marine consortium are closely related to poly(ethylene terephthalate) biodegradation from terrestrial microbes. Although there are multiple genes and organisms with the potential to perform a degradation step, only a few of these are active during biodegradation. Our results elucidate the potential of marine microorganisms to mineralize biodegradable plastic polymers and describe the mechanisms of labor division within the community to get maximum energetic yield from a complex synthetic substrate.

2020-09-25 | PXD018391 | Pride

Project description:microbial diversity of plastic film mulching land

| PRJNA905891 | ENA

Project description:Studies of plastic film and straw mulching on denitrifier of nosZ

| PRJNA999026 | ENA

Project description:Studies of plastic film and straw mulching on denitrifier of nirS

| PRJNA999023 | ENA

Project description:Biodegradable film mulching increases soil microbial network complexity and ecological stochasticity and decreases nitrogen cycling genes

| PRJNA1054347 | ENA

Project description:Studies of plastic film and straw mulching on ammonia oxidizer of AOA

| PRJNA998237 | ENA

Project description:Studies of plastic film and straw mulching on ammonia oxidizer of AOB

| PRJNA998245 | ENA

Project description:Plastic film mulching with nitrogen application activates rhizosphere microbial nitrification and dissimilatory nitrate reduction

| PRJNA1154609 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data