Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Homo sapiens isolate:SLK, also known as Caki1

ABSTRACT: Homo sapiens isolate:SLK, also known as Caki1 Raw sequence reads

PROVIDER: PRJNA566164 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Homo sapiens isolate:not known

Project description:Homo sapiens isolate:not known Genome sequencing

| PRJNA449839 | ENA

Gene-expression profiling of SLK-knockout NeuNDL-transformed cell lines

Project description:Subconfluent cycling cells from immortalized SLK-expressing and knockout NeuNDL-derived cells were profiled across multiple passages to identify differentially regulated genes in the absence of SLK using an Affymetrix Mouse Gene 2.0 ST array

2019-03-20 | GSE128514 | GEO

Mock or latently infected KSHV cells (BCBL, SLK and HFF)

Project description:[original title] Mock or latently infected KSHV cells (BCBL, SLK and HFF) vs common reference (mixture of RNA from both infected and uninfected cells). Expression profiling of latently infected cells using a custom tiling microarray. SLK and HFF cells were infected and selected for rKSHV.219. Mock infected SLK and HFF cells served as controls for each of these two stably infected cells, respectively. BJAB cells served as uninfected controls for the BCBL-1 cells. Biological replicates were harvested and analyzed.

2010-03-24 | GSE20443 | GEO

Role of the Ste20-like kinase SLK in Podocyte Adhesion

Project description:SLK controls the cytoskeleton, cell adhesion and migration. Analysis of a protein kinase phosphorylation site dataset showed that podocyte adhesion proteins – paxillin, vinculin and talin-1 may be potential SLK substrates. The project examines if these adhesion proteins are substrates of SLK.

2024-01-22 | PXD046962 | Pride

Mock or latently infected KSHV cells (BCBL, SLK and HFF)

2010-06-05 | E-GEOD-20443 | biostudies-arrayexpress

Ectopic expression of viral circRNAs in SLK cell line

Project description:Total RNA was extracted from SLK cells that constitutively express select KSHV circular RNAs, and transcriptome analysis was performed by deep-sequencing (PE150).

2021-06-30 | GSE165528 | GEO

Effect of LANA deletion on the host gene expression during de novo KSHV infection of SLK cells.

Project description:Human SLK cells were infected with wildtype (wt) and LANA knockout (KO) Kaposi's sarcoma-associated herpesvirus (KSHV), separately for 3 days. Cellular gene expression changes were identified upon the wild type and LANA KO KSHV virus infection compared to the uninfected SLK cells using the human gene expression microarray U133plus2.0. 2 independent biological replicates from uninfected SLK cells, wild type KSHV infected SLK cells at 72hrs post-infection (hpi) , and LANA KO infected SLK cells at 72 hrs post-infection were collected and RNA was prepared for microarray analysis.

2016-08-01 | E-GEOD-78282 | biostudies-arrayexpress

Homo sapiens isolate:SW480

Project description:Homo sapiens isolate:SW480 Raw sequence reads

| PRJNA312562 | ENA

Homo sapiens isolate:hUC

Project description:Homo sapiens isolate:hUC Raw sequence reads

| PRJNA643879 | ENA

Homo sapiens isolate:A375

Project description:Homo sapiens isolate:A375 Raw sequence reads

| PRJNA316220 | ENA