Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNAseq transcriptome profiling of melanoma cell lines

ABSTRACT: RNAseq transcriptome profiling of melanoma cell lines

PROVIDER: PRJNA590492 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNAseq transcriptome profiling of melanoma cell lines

Project description:The transcriptome of 55 cutaneous melanoma cell lines was assessed using RNAseq.

2019-11-20 | GSE140673 | GEO

Gene expression profiling of melanoma cell lines by RNASeq

Project description:Panel of 53 melanoma cell lines were gene expression profiled by RNA-Seq for molecular classification

2018-04-30 | GSE80829 | GEO

Multiomic profiling of early-passage melanoma cell lines.

Project description:This study utilises multiomic profiling of early-passage melanoma cell lines to explore the interactions between distinct modalities of molecular regulation influencing melanoma cellular phenotype.

| EGAS00001004536 | EGA

RNAseq in melanoma

Project description:RNAseq in melanoma

| PRJNA1290390 | ENA

RNAseq and Small-RNAseq dataset to comprehensively study the miRNA expression profiling of drug-resistant melanoma patients and cell lines

Project description:RNAseq and Small-RNAseq dataset to comprehensively study the miRNA expression profiling of drug-resistant melanoma patients and cell lines

| PRJNA694121 | ENA

Activity-Based Protein Profiling of BRAF Inhibitor Resistance in Melanoma Cell Lines

Project description:To investigate mechanisms of resistance to BRAF inhibitor therapy in melanoma, BRAF mutant cell lines have been chronically exposed to BRAFi to create phenotypes with acquired drug resistance. Activity-based protein profiling with desthiobiotinylating ATP probes (ActivX, Thermo) is used to examine the differences between naive and drug-resistant cells.

2016-12-13 | PXD004343 | Pride

Transcriptional profiling of human MCF7 cell lines by RNASeq

Project description:Transcriptional profiling of human MCF7 cell lines by RNASeq

| PRJNA666627 | ENA

The methylome of invasive melanoma cell lines

Project description:Melanoma cell lines were established and used for methylome profiling with Illumina HM450 beadchip. The molecular alterations in selected invasive melanoma cell populations were compared to those in the original cell lines by performing DNA methylation (Illumina HM450K) assays

2020-01-31 | GSE115852 | GEO

Genome-wide DNA Methylation and Transcriptome Analysis of Non-invasive and Invasive Melanoma Cell Lines (RNASeq)

Project description:Melanoma is a very aggressive type of skin cancer, which renders it difficult to treat because of extensive heterogeneity frequently observed in melanoma tumours. Here we hypothesized that gene expression and DNA methylation differences would correlate with invasiveness in melanoma cells. To address this question, we carried out genome-wide transcriptome and methylome investigations in non-invasive and invasive groups of melanoma cell lines.

2021-04-06 | GSE153592 | GEO

Mouse melanoma cell lines transcriptome sequencing

Project description:n this project we have sequenced the transcriptome of several comonly used mouse melanoma cell lines. Our aim is to understand what mutations and rearrangements are found in these cell lines to gain a better understanding of the genes that contribute to melanomagenesis. As these cell lines are used as models of melanoma these sequences represent an important resource for functional studies. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

2015-01-17 | E-ERAD-94 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data