Project description:Deletion of the IscR homolog ZMO_0422 was performed in Zymomonas mobilis to investigate the role of Fe-S cluster biogenesis in Zymomonas. Here we perform genome-wide transcirptomics study to examine transcript chagnes in delta-ZMO_0422 compared to WT Zymomonas mobilis under both aerobic and anaerobic growth conditions.

2025-11-20 | GSE304389 | GEO

Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Project description:Zymomonas mobilis subsp. mobilis ZM4 Mg and YE transcriptom Raw sequence reads

| PRJNA601020 | ENA

Zymomonas mobilis oxidative stress transcriptomics

Project description:Zymomonas mobilis is an important bioenergy organism that has potential to produce biofuels, including ethanol, in high volumes. Here we examined the response of Zymomonas mobilis to various oxidative stresses using genome-scale transcriptomics data. We first examined the transcrpit abundance in WT aerobic growth compared to aerobic grown in paraquat, which forms superoxide. Under anaerobic growth conditions we compared WT Zymomonas mobilis with strains grown in media lacking iron as well as strains lacking iron that were treated with the iron chelator DIP before collection. Finally we examined transcript abundance in cells lacking ZMO_0422 (Rrf2 family transcription factor homolog) and ZMO_1411 (Fur homolog) grown under anaerobic conditions.

2025-11-20 | GSE304360 | GEO

Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Project description:Zymomonas mobilis raw sequence reads

| PRJNA302104 | ENA

Zymomonas mobilis subsp. mobilis

Project description:Zymomonas mobilis subsp. mobilis Genome sequencing

| PRJNA749177 | ENA

Zymomonas mobilis subsp. mobilis ATCC 10988

Project description:Zymomonas mobilis subsp. mobilis ATCC 10988 Genome sequencing

| PRJNA208403 | ENA