Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome-wide maps of p53 binding sites in human embryonic stem cell H9 derived trilineage.

ABSTRACT: Genome-wide maps of p53 binding sites in human embryonic stem cell H9 derived trilineage.

PROVIDER: PRJNA595739 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10694807_1.fastq.gz	Fastqsanger.gz
	SRR10694807_2.fastq.gz	Fastqsanger.gz
	SRR10694808_1.fastq.gz	Fastqsanger.gz
	SRR10694808_2.fastq.gz	Fastqsanger.gz
	SRR10694809_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 46

Similar Datasets

Genome-wide maps of p53 binding sites in human embryonic stem cell H9 derived trilineage.

Project description:To determine the roles of IFI16-p53 interaction during H9-trilineage specification, we performed ChIP-seq to derive a genome-wide profile of p53-binding genes after IFI16 knockdown by shRNA-1865. p53 binding sites were mapped on Day 2 of trilineage induction.

2020-03-03 | GSE142050 | GEO

PRO-cap from H9 (ENCSR359PWL)

Project description:A run-on assay that precisely maps the transcription start sites genome-wide with high sensitivity and specificity in H9 ESCs. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2026-02-28 | GSE322355 | GEO

Genome-wide maps of ARID1A binding genes in H9 human embryonic stem cells

Project description:Genome-wide maps of ARID1A binding genes in H9 human embryonic stem cells

| PRJNA638954 | ENA

Genome-wide maps of ARID1A binding genes in H9 human embryonic stem cells.

Project description:Genome-wide maps of ARID1A binding genes in H9 human embryonic stem cells.

| PRJNA578922 | ENA

Coupling p53 binding and nucleosome occupancy measurements at p53 binding sites

2010-08-09 | GSE22783 | GEO

Coupling p53 binding and nucleosome occupancy measurements at p53 binding sites

Project description:We were interested to explain why p53 binds some high affinity sites in contrast to other high affinity sites that are not bound by p53. p53 binding was measured using p53 ChIP-CHIP and in parallel nucleosome occupancy was measured on these same sites Comparison between p53 binding and nucleosome occupancy at p53 predicted binding sites ChIP-CHIP of p53 from MCF7EcoR under Basal conditions and MCF7EcoR treated with NCS (Activated) and Mononucleosomal extraction from MCF7sip53, MCF7EcoR under Basal conditions and MCF7EcoR treated with NCS (Activated) Expression analysis of MCF7sip53 and MCF7EcoR treated with NCS (Activated)

2010-08-09 | E-GEOD-22783 | biostudies-arrayexpress

Genome-wide maps of apurinic sites (AP-sites) and 8-oxoG derived secondary AP-sites

Project description:Genome-wide maps of apurinic sites (AP-sites) and 8-oxoG derived secondary AP-sites

| PRJNA497112 | ENA

Transcriptional profiling of nutrient-balanced early trilineage differentiations derived from H9 hPSCs.

Project description:Transcriptional profiling of nutrient-balanced early trilineage differentiations derived from H9 hPSCs.

| PRJNA524638 | ENA

Pseudomonas sp. H9 strain:H9

Project description:Pseudomonas sp. H9 strain:H9 Genome sequencing and assembly

| PRJNA526342 | ENA

ChIP-seq for Nanog in H9 hESC

Project description:mapping Nanog TF binding sites in H9 hESC