Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Anolis sagrei

ABSTRACT: Anolis sagrei overview

PROVIDER: PRJNA604292 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR14136829_1.fastq.gz	Fastqsanger.gz
	SRR14136829_2.fastq.gz	Fastqsanger.gz
	SRR14136830_1.fastq.gz	Fastqsanger.gz
	SRR14136830_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 743

Similar Datasets

Anolis sagrei

Project description:Anolis sagrei Raw sequence reads

| PRJNA1031661 | ENA

Anolis sagrei

Project description:Anolis sagrei SbfI RADseq raw sequence reads

| PRJNA925469 | ENA

Anolis sagrei ordinatus

Project description:Anolis sagrei ordinatus Genome sequencing and assembly

| PRJNA783271 | ENA

Anolis sagrei

Project description:Hormone-mediated increases in sex-biased gene expression in Anolis sagrei

| PRJNA348684 | ENA

Anolis sagrei isolate:rAnoSag1

Project description:Anolis sagrei (brown anole lizard) genome, rAnoSag1, maternal haplotype

| PRJNA1080665 | ENA

Anolis sagrei isolate:rAnoSag1

Project description:Anolis sagrei (brown anole lizard) genome, rAnoSag1, paternal haplotype

| PRJNA1080664 | ENA

Identification of Hedgehog signaling responsive genes in A. sagrei and M. musculus via transcriptional profiling

Project description:The brown anole lizard, Anolis sagrei, is an emerging squamate model for developmental and functional genetic studies. To develop additional tools and resources for mechanistic studies of signaling pathways and cellular processes in A. sagrei, we established an in vitro system. Using this approach, we studied Hedgehog (Hh) signaling, one of the key developmental signaling pathways, which has evolved across the metazoa. We investigated Hh pathway-induced transcriptional changes in two evolutionarily distinct tetrapods: A. sagrei, and M. musculus, to identify the species-specific and evolutionarily shared responses. We report that ~45 % of genes induced as a response to Hh pathway activation in A. sagrei, are shared with M. musculus. To further increase the versatility of A. sagrei as a squamate model system for gene editing and genomic studies, we established and characterized a new immortalized A. sagrei embryonic fibroblast cell line ASEC-1. We performed whole-genome sequencing analysis to annotate the set of polymorphisms within this cell line. We conclude that transcriptome characterization of the ASEC-1 cell line would permit further investigations dissecting the complex biological and evolutionary aspects of Hh signaling.

2023-12-15 | GSE242114 | GEO

Anolis carolinensis

Project description:Sequencing of flow sorting derived microchromosome-specific DNA of Anolis carolinensis and Anolis sagrei

| PRJNA314937 | ENA

Anolis equestris

Project description:Anolis equestris overview

| PRJNA189816 | ENA

Anolis apletophallus

Project description:Anolis apletophallus overview

| PRJNA947294 | ENA