Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: dental plaque Raw sequence reads

PROVIDER: PRJNA606440 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11113039.fastq.gz	Fastqsanger.gz
	SRR11113039_1.fastq.gz	Fastqsanger.gz
	SRR11113039_2.fastq.gz	Fastqsanger.gz
	SRR11177783.fastq.gz	Fastqsanger.gz
	SRR11177783_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 17

Similar Datasets

biofilm metagenome

Project description:dental plaque biofilm Raw sequence reads

| PRJNA294235 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

oral dental plaque bacterium

Project description:Oral dental plaque bacterium Raw sequence reads

| PRJNA1063865 | ENA

GNPS - Multi-omics of dental plaque in patients with diabetes and periodontal disease

Project description:This repository contains raw files and intermediate processing files for an integrated multi-omics analysis of dental plaque.

2019-07-23 | MSV000084126 | GNPS

Transcriptome Analysis of Human Supragingival Dental Plaque Microbiome from 19 Twin Pairs with and without Dental Caries

Project description:The study aims to assess gene expression in plaque samples collected from twin pairs that are both concordant and discordant with respect to dental Caries diagnosis. File Naming Conventions are as follows: Patient ID : 4 digit identifier Diagnosis : Caries Negative(CN) or Caries Positive(CP) Type of Twin: Monozygotic(MZ)or Dizygotic(DZ) Pair to xxxx: 4 digit twin identifier maps to the Patient ID E.g: 2126_CP_MZ_PairTo_2125_fastqc - 2126 is a caries positive patient and pairs to monozygotic twin pair 2125. Plaque samples from twin pairs that are both concordant and discordant with respect to dental Caries diagnosis are enriched for bacterial messenger RNA to study the gene expression differences in the samples. RNA was extracted from RNAprotect (Qiagen, In c.) treated dental plaque scrapings from 38 patients. Amplified cDNA was created and rRNA sequence was removed by subtractive hybridization. Individual patient samples were run on a single lane of an Illumina Genome Analyzer.

2011-09-26 | E-GEOD-31439 | biostudies-arrayexpress

Multi-omics of dental plaque in patients with diabetes and periodontal disease

Project description:This repository contains raw files and intermediate processing files for an integrated multi-omics analysis of dental plaque.

2019-07-23 | MSV000084126 | MassIVE

Streptococcus vestibularis, Gemella haemolysans, Streptococcus gwangjuense

Project description:microbes isolated from dental plaque of healthy human donors Raw sequence reads

| PRJNA880893 | ENA

Project description:GH12 dental plaque

| PRJNA607443 | ENA

Project description:dental plaque metagenome

| PRJNA703092 | ENA

Project description:Dental plaque metagenome