Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: microbial diversity on sheep intestine

PROVIDER: PRJNA613527 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11356239_1.fastq.gz	Fastqsanger.gz
	SRR11356239_2.fastq.gz	Fastqsanger.gz
	SRR11356240_1.fastq.gz	Fastqsanger.gz
	SRR11356240_2.fastq.gz	Fastqsanger.gz
	SRR11356241_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 2)

Project description:Campylobacter jejuni has become the predominant cause of sheep abortions in the U.S. However, little is know about the genetic diversity among the isolates collected from different time periods. In this study, the genetic diversity of sheep aborion isolates of C. jejuni was investigated by Array-based CGH

2014-02-11 | GSE54859 | GEO

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 1)

Project description:Campylobacter jejuni has become the predominant cause of sheep abortions in the U.S. However, little is know about the genetic diversity among the isolates collected from different time periods. In this study, the genetic diversity of sheep abortion isolates of C. jejuni was investigated by Array-based CGH

2014-02-11 | GSE54858 | GEO

RNA seq of ventral rumen wall of Australian sheep

Project description:Experiment to understand relationships between sheep rumen wall transcriptome and microbial methane emissions

2017-12-30 | GSE81847 | GEO

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 2)

2014-02-11 | E-GEOD-54859 | biostudies-arrayexpress

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 1)

Project description:Campylobacter jejuni has become the predominant cause of sheep abortions in the U.S. However, little is know about the genetic diversity among the isolates collected from different time periods. In this study, the genetic diversity of sheep abortion isolates of C. jejuni was investigated by Array-based CGH Each isolate was compared to IA3902, a dye-swap replicate was applied for each isolate

2014-02-11 | E-GEOD-54858 | biostudies-arrayexpress

Analysis of copy number variations by SNP50 BeadChip array in Chinese sheep

Project description:The sheep (Ovis aries) plays a major socio-economic role in the world. Copy number variations (CNVs) are increasingly recognized as a key and potent source of genetic variation and phenotypic diversity, but little is known about the extent to which CNVs contribute to genetic variation in Chinese sheep breeds. Analyses of CNVs in the genomes of eight sheep breeds were performed using the sheep SNP50 BeadChip genotyping array. A total of 111 CNV regions (CNVRs) were obtained from 160 Chinese sheep breeds. These CNVRs covered 13.75 Mb of the sheep genome sequence. A total of 22 Go terms and 17 candidate genes were obtained from the functional analysis. Ten CNVRs were selected for validation, of which 7 CNVRs were further experimentally confirmed by quantitative PCR. Four candidate genes were selected to confirm the results of the functional analysis. These results provide a resource for furthering understanding of ruminant biology, and for further improving the genetic quality of sheep breeds.

2017-10-01 | GSE71584 | GEO

Project description:Microbial diversity in mice intestine.

| PRJNA713515 | ENA

Project description:microbial diversity on human intestine

| PRJNA783481 | ENA

Project description:Microbial diversity in rat intestine.

| PRJNA555676 | ENA

Project description:Microbial diversity of Tibetan sheep

| PRJNA1232930 | ENA