Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Daucus carota subsp. sativus cultivar:Nantaise

ABSTRACT: Transcriptome from dark and light-grown carrot roots (Daucus carota subsp. sativus )

PROVIDER: PRJNA626692 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11600390.fastq.gz	Fastqsanger.gz
	SRR11600391.fastq.gz	Fastqsanger.gz
	SRR11600392.fastq.gz	Fastqsanger.gz
	SRR11600393.fastq.gz	Fastqsanger.gz
	SRR11600394.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Organism overview

| PRJNA29323 | ENA

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Raw sequence reads

| PRJNA821411 | ENA

Comparing root transcriptomes of cultivated and wild carrots

Project description:Cultivated carrot (Daucus carota L. ssp. sativus) was domesticated from wild carrot (Daucus carota L. ssp. carota) with radical different traits. The aim of this study was to compare the root transcriptomes between cultivated and wild carrots for SNP discovery, inferring domestication process, and identifying domestication genes. Six cultivated carrots representing main European carrot root types and five wild carrot populations from widely dispersed sites were used. The root transcriptomes were sequenced with multiplexing paried-end sequencing in Illumina Genome Analyzer IIx.

2013-10-24 | E-MTAB-1340 | biostudies-arrayexpress

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Transcriptome or Gene expression

| PRJNA350691 | ENA

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Genome sequencing and assembly

| PRJNA562705 | ENA

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Transcriptome or Gene expression

| PRJNA80035 | ENA

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Transcriptome or Gene expression

| PRJNA574412 | ENA

Daucus carota subsp. sativus

Project description:Daucus carota subsp. sativus Transcriptome or Gene expression Project

| PRJNA291977 | ENA

Daucus carota subsp. sativus cultivar:DH1

Project description:Daucus carota subsp. sativus DCARv3 Transcriptome

| PRJNA865166 | ENA

Transcriptome evaluation of gene expression changes during carotenoid accumulation in the storage root of carrot (Daucus carota)

Project description:In this study, a cross species hybridization (CSH) approach was used to evaluate whole transcriptome changes during carotenoid accumulation in the storage root of carrot (Daucus carota). Carotenoids are isoprenoid compounds providing red, yellow and orange color to plants. Previous gene expression analyses of carotenoid accumulation in non-model plant species have primarily used a candidate gene approach. Since global transcriptome analyses require extensive genome sequence, in the absence of these genomic resources an alternate approach uses platforms developed for model plant species. To assess transcriptome patterns associated with carotenoid pigmentation in carrot storage root, two carrot sibling inbred lines, B8788, true breeding for orange color and B8750, true breeding for white root color, were hybridized to the Medicago Affymetrix GeneChip microarray.

2014-08-13 | GSE49873 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data