Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial and eukaryotic diversity of microbial mats in Re island

PROVIDER: PRJNA627173 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11580646_1.fastq.gz	Fastqsanger.gz
	SRR11580646_2.fastq.gz	Fastqsanger.gz
	SRR11580647_1.fastq.gz	Fastqsanger.gz
	SRR11580647_2.fastq.gz	Fastqsanger.gz
	SRR11580648_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Project description:Bacterial and eukaryotic diversity of microbial mats in Re island

| PRJNA627371 | ENA

Middle Island Sinkhole microbial mat protein stable isotope fingerprinting

Project description:Metaproteomics data for a protein-stable isotope fingerprinting (P-SIF) study of phototrophic, sulfur-cycling benthic microbial mats in Middle Island Sinkhole, Lake Huron, USA

2022-10-27 | MSV000090594 | MassIVE

Middle Island Sinkhole Microbial Mat - Seasonality

Project description:Samples from benthic phototrophic microbial mats of Middle Island Sinkhole, Lake Huron, MI, USA. Peptides labeled in vitro for quantitative analysis by diDO-IPTL (Waldbauer et al. 2017 Anal. Chem.).

2022-01-20 | MSV000088706 | MassIVE

Xenomicrobiota transplant experiment

Project description:Gut microbes elicit specific changes in gene expression in the colon of mice. We colonized germ-free mice with microbial communities from the guts of humans, zebrafish and termites, human skin and tongue, soil and estuarine microbial mats. We used microarrays to detail the differences in global gene expression in colon tissue that are caused by the different microbial communities 28 days after gavage into the germfree animal. Three biological replicates per group, male C57BL/6 mice (12-16 weeks old)

2014-10-02 | E-GEOD-57589 | biostudies-arrayexpress

Xenomicrobiota transplant experiment

2014-10-02 | GSE57589 | GEO

Project description:Microbial diversity fish associated bacterial communities_Vulcano island

| PRJNA1117420 | ENA

Antarctic microbial mats from King George Island

Project description:Antarctic microbial mats from King George Island Metagenome

| PRJNA431087 | ENA

Changes in bacterial diversity and composition detected in plasma determine immunological outcome in HIV+ persons initiating antiretroviral therapy

Project description:The impact of the microbiome on HIV disease is widely acknowledged although the mechanisms downstream of fluctuations in microbial composition remain speculative. We detected rapid, dynamic changes in translocated microbial constituents during two years after cART initiation. An unbiased systems biology approach revealed two distinct pathways driven by changes in the abundance ratio of Serratia to other bacterial genera. Increased CD4 T cell numbers over the first year were associated with high Serratia abundance, pro-inflammatory innate cytokines, and metabolites that drive Th17 gene expression signatures and restoration of mucosal integrity. Subsequently, decreased Serratia abundance and downregulation of innate cytokines allowed re-establishment of systemic T cell homeostasis promoting restoration of Th1 and Th2 gene expression signatures. Analyses of three other geographically distinct cohorts of treated HIV infection established a more generalized principle that changes in diversity and composition of translocated microbial species influence systemic inflammation and consequently CD4 T cell recovery.

2021-05-04 | GSE172557 | GEO

Project description:Bacterial diversity of white microbial mats in marine mangrove ecosystems of Guadeloupe

| PRJNA1281175 | ENA

Helicobacter pylori bacterial populations

Project description:Sexual reproduction and recombination are essential for the survival of most eukaryotic populations. Until recently, the impact of these processes on the structure of bacterial populations has been largely overlooked. The advent of large-scale whole-genome sequencing and the concomitant development of molecular tools, such as microarray technology, facilitate the sensitive detection of recombination events in bacteria. These techniques are revealing that bacterial populations are comprised of isolates that show a surprisingly wide spectrum of genetic diversity at the DNA level. Our new awareness of this genetic diversity is increasing our understanding of population structures and of how these affect host?pathogen relationships. Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Keywords: Logical Set

2005-10-20 | GSE3479 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data