Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq analysis of HCT116, HCP-1 and DLD-1 cells after IOX1 treatment

ABSTRACT: RNA-seq analysis of HCT116, HCP-1 and DLD-1 cells after IOX1 treatment

PROVIDER: PRJNA627710 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11600375.fastq.gz	Fastqsanger.gz
	SRR11600376.fastq.gz	Fastqsanger.gz
	SRR11600377.fastq.gz	Fastqsanger.gz
	SRR11600378.fastq.gz	Fastqsanger.gz
	SRR11600379.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

RNA-seq analysis of HCT116, HCP-1 and DLD-1 cells after IOX1 treatment

Project description:In order to examine how IOX1 affects the global Wnt target gene transcriptome in colorectal cancer cells, we performed RNA-sequencing in HCT116, DLD-1 and HCP-1 cells treated with IOX1. IOX1 led to global inhibition of Wnt target transcription in colorectal cancer cells.

2021-01-13 | GSE149233 | GEO

RNA-seq of colorectal cancer cell line HCT116 and DLD-1 cells treated with PRIMA-1met or oxaliplatin or combination therapy

Project description:RNA-seq of colorectal cancer cell line HCT116 and DLD-1 cells treated with PRIMA-1met or oxaliplatin or combination therapy

2025-01-15 | GSE254323 | GEO

RNA-seq analysis of dolastatin 15 treatment in HCT116 cells

Project description:RNA-seq analysis of dolastatin 15 treatment in HCT116 cells

| PRJNA528759 | ENA

Difference of gene expression among DLD1, oxaliplatin resistant clones derived from DLD1, HCT116, and oxaliplatin resistant clones derived from HCT116

Project description:Gene expression between DLD1 and DLD1 derived oxaliplatin resistant clones (DLD/OHP1, DLD/OHP4, and DLD/OHP5) was assessed Gene expression between HCT116 and HCT116 derived oxaliplatin resistant clones (HCT/OHP1, HCT/OHP3, and HCT/OHP5) was assessed

2020-05-31 | GSE77932 | GEO

ChIP-seq of AP4 binding in human colorectal cancer cells DLD-1.

Project description:In order to comprehensively identify genes directly regulated by AP4, a genome-wide chromatin-immunoprecipitation analysis (ChIP) followed by next generation sequencing (ChIP-seq) was performed after activation of a conditional AP4 allele in DLD-1 cells. One DLD-1 Sample was sequenced.

2013-05-31 | E-GEOD-46935 | biostudies-arrayexpress

HMGA2-driven gene expression in human colorectal DLD-1 cells.

Project description:Gene expression analysis of stable HMGA2-overexpressing DLD-1 cells (DLD-1-HMGA2) and its control cells (DLD-1-Vector).

2019-08-29 | GSE136544 | GEO

RNA-seq analysis of dolastatin 15 treatment in HCT116 cells

Project description:Dolastatin 15 is a known tubulin binding agent and shows remarkable differential cytotoxicity against a panel of colorectal HCT116 isogenic cells. The compound causes anti-vascularization effect in human endothelial cells (HUVEC) in a dose dependent manner. Antiangiogenic effect was further validated in a zebrafish genetic model with activated HIF

2020-03-22 | GSE128748 | GEO

HCT116-Clone2 cells 10 min after XR treatment at 4 Gy

Project description:cDNA microarray study of X-radiation (XR) resistant HCT116-Clone2 cells 10 minutes after XR treatment at 4Gy versus unirradiated HCT116-Clone10 cells. HCT116-Clone10 cells have similar XR response with parental HCT116 cells. Keywords = X-radiation (XR) Keywords = XR resistant Keywords = colorectal cancer cells Keywords = HCT116 Keywords: repeat sample

2004-06-04 | GSE799 | GEO

HCT116-Clone2 cells 24 hours after XR treatment at 4 Gy

Project description:cDNA microarray study of X-radiation (XR) resistant HCT116-Clone2 cells 24 hours after XR treatment at 4Gy versus unirradiated HCT116-Clone10 cells. HCT116-Clone10 cells have similar XR response with parental HCT116 cells. Keywords = X-radiation (XR) Keywords = XR resistant Keywords = colorectal cancer cells Keywords = HCT116 Keywords: repeat sample

2004-06-04 | GSE801 | GEO

HCT116-Clone2 cells 6 hours after XR treatment at 4 Gy

Project description:cDNA microarray study of X-radiation (XR) resistant HCT116-Clone2 cells 6 hours after XR treatment at 4Gy versus unirradiated HCT116-Clone10 cells. HCT116-Clone10 cells have similar XR response with parental HCT116 cells. Keywords = X-radiation (XR) Keywords = XR resistant Keywords = colorectal cancer cells Keywords = HCT116 Keywords: repeat sample

2004-06-04 | GSE800 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data