Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Pig farm wastewater Raw sequence reads (16S rRNA)

PROVIDER: PRJNA644106 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12151600.fastq.gz	Fastqsanger.gz
	SRR12151601.fastq.gz	Fastqsanger.gz
	SRR12151602.fastq.gz	Fastqsanger.gz
	SRR12151603.fastq.gz	Fastqsanger.gz
	SRR12151604.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 89

Similar Datasets

pig farm wastewater

Project description:pig farm wastewater Raw sequence reads

| PRJNA552555 | ENA

Pig farm wastewater

Project description:Pig farm wastewater Raw sequence reads

| PRJNA626349 | ENA

Project description:The 16S rRNA data from pig farm wastewater

| PRJNA626406 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Indole-3-acetic acid degradation in a novel strain Pseudomonas composti LY1

Project description:Indole-3-acetic acid (IAA), knows as common plant hormone, is one of the most distributed indole derivatives in the environment. A novel strain, which was able to use IAA as sole source of carbon and nitrogen, was isolated from farm soil, identified and classified as Pseudomonas composti LY1 based on 16S rRNA sequence and genome analysis. The optimal growth conditions for LY1 with IAA are characterized. Proteome profile of strain LY1 to IAA and citrate were analyzed and compared using label free strategy with LC-MS/MS.

2021-09-08 | PXD014968 | Pride

air metagenome

Project description:Pig farm air Raw sequence reads

| PRJNA380718 | ENA

Pig farm wastewater

Project description:Pig farm wastewater Metagenome

| PRJNA774511 | ENA

Project description:Pig farm wastewater Metagenome

| PRJNA1012813 | ENA

LC-MS/MS of autotrophic culture KS, that performs nitrate reduction coupled to iron(II) oxidation (NDFO)

Project description:Nitrate-reducing iron(II)-oxidizing bacteria are widespread in the environment contribute to nitrate removal and influence the fate of the greenhouse gases nitrous oxide and carbon dioxide. The autotrophic growth of nitrate-reducing iron(II)-oxidizing bacteria is rarely investigated and poorly understood. The most prominent model system for this type of studies is enrichment culture KS, which originates from a freshwater sediment in Bremen, Germany. To gain insights in the metabolism of nitrate reduction coupled to iron(II) oxidation under in the absence of organic carbon and oxygen limited conditions, we performed metagenomic, metatranscriptomic and metaproteomic analyses of culture KS. Raw sequencing data of 16S rRNA amplicon sequencing, shotgun metagenomics (short reads: Illumina; long reads: Oxford Nanopore Technologies), metagenome assembly, raw sequencing data of shotgun metatranscriptomes (2 conditions, triplicates) can be found at SRA in https://www.ncbi.nlm.nih.gov/bioproject/PRJNA682552. This dataset contains proteomics data for 2 conditions (heterotrophic and autotrophic growth conditions) in triplicates.

2021-05-17 | PXD023186 | Pride

pig gut metagenome

Project description:Pig gut - 16S rRNA gene sequences Raw sequence reads

| PRJNA353747 | ENA