Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Microbiome of different life stages of the anhydrobiotic midge

PROVIDER: PRJNA659554 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12534292.fastq.gz	Fastqsanger.gz
	SRR12534292_1.fastq.gz	Fastqsanger.gz
	SRR12534292_2.fastq.gz	Fastqsanger.gz
	SRR12534293.fastq.gz	Fastqsanger.gz
	SRR12534293_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Project description:WGS data of the anhydrobiotic midge Polypedilum pembai (Diptera:Chironomidae)

| PRJNA996593 | ENA

Project description:Population genomics of the anhydrobiotic midge Polypedilum vanderplanki (Diptera: Chironomidae)

| PRJNA996125 | ENA

Project description:Microbiome of the different life stages of Corallium rubrum

| PRJNA1136805 | ENA

RNA-Seq analysis of developmental, juvenile, and anhydrobiotic stages of Hypsibius dujardini and Ramazzottius varieornatus

Project description:Limno-terrestrial tardigrades enter a state called anhydrobiosis when exposed to desiccation, and acquire tolerance against various extreme environments. The anhydrobiotic tardigrade Hypsibius dujardini, is a non-pigmented tardigrade easy to culture and RNAi method have been established, therefore making it a model tardigrade for tardigrade molecular research. Previous genome assemblies of this tardigrade had increased size due to heterozygosity. Here, we have sequenced the genome of H. dujardini using single individual Illumina DNA-Seq data and PacBio long read data, and employed a heterozygosity aware assembly method to assemble a near-complete high quality genome. In order to annotate the genome with gene predictions, we conducted RNA-Sequencing of various stages of developmental, juvenile, adult, and anhydrobiotic stage H. dujardini and Ramazzottius varieornatus, a tardigrade capable of rapid anhydrobiosis entry, and used these data for gene prediction with BRAKER v1.9 or differential gene expression analysis of the active and anhydrobiotic stages.

2017-02-28 | GSE94295 | GEO

Project description:Kogiid Microbiome Across Life History Stages

| PRJNA605971 | ENA

Schistosoma mansoni transcriptomics at different life stages

Project description:Schistosoma mansoni transcriptomics at different life stages

| PRJEB2350 | ENA

Differential expression for rice-gall midge interaction

Project description:We exposed Kavya rice seedlings to different gall midge biotypes, GMB1 and GMB4M, which exhibit incompatible and compatible interactions, respectively.

2011-11-16 | GSE22538 | GEO

Brugia malayi transcriptomics at different life cycle stages

Project description:Brugia malayi transcriptomics at different life cycle stages

| PRJEB2709 | ENA

Transcriptomic analysis of Pv11 cells derived from Polypedilum vanderplanki

Project description:RNA-Seq of Pv11 cells derived from the anhydrobiotic organism Polypedilum vanderplank, exposed to various stresses.

2022-03-07 | GSE158443 | GEO

Project description:The gut microbiome analysis of Atlantic salmon at different life stages and vaccination status

| PRJNA932862 | ENA