Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome profiling of Mature B cells residing in the bone marrow.

ABSTRACT: Transcriptome profiling of Mature B cells residing in the bone marrow.

PROVIDER: PRJNA665371 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12702413_1.fastq.gz	Fastqsanger.gz
	SRR12702413_2.fastq.gz	Fastqsanger.gz
	SRR12702414_1.fastq.gz	Fastqsanger.gz
	SRR12702414_2.fastq.gz	Fastqsanger.gz
	SRR12702415_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Transcriptome profiling of Mature B cells residing in the bone marrow.

Project description:Purpose: The role of intrinsic apoptosis in mature B cell homeostasis is still elusive. The aim of this study is to compare the transcriptome of mature B cells that are either sensitive or resistant to intrinsic apoptosis. Methods: Bone marrow-residing Mature B cells were FACS-sorted as B220high CD93- IgM+ with >99.8% purity. RNA was extracted with Qiagen RNA extraction kit.

2021-06-16 | GSE158475 | GEO

Transcriptional profile of bone marrow mature neutrophils

Project description:Transcriptional profile of bone marrow mature neutrophils

| PRJNA973587 | ENA

Transcriptional profile of bone marrow mature neutrophils

Project description:We analyzed the impact of amoxicillin on the transcriptional profile of bone marrow mature neutrophils from infected mice withStreptococcus pneumoniae

2023-10-03 | GSE232689 | GEO

RNA sequencing of neutrophils residing in bone marrow, peripheral blood and lung

Project description:RNA sequencing of neutrophils residing in bone marrow, peripheral blood and lung

| PRJEB38531 | ENA

RNA sequencing of neutrophils residing in bone marrow, peripheral blood and lung

Project description:Generation of organ-infiltrating neutrophils occurs in hematopoietic tissues and organs, such as bone marrow and spleen, in response to tumor- and host-derived factors. The de novo expanded neutrophils then egress from hematopoietic sites, circulate through the blood vessels and infiltrate into the organ interstitia and parenchyma. During above trafficking process, neutrophils can undergo phenotypic and functional changes in response to tissue environments. To determine the difference among neutrophils residing in the hematopoietic site—BM, circulating in the blood, and those infiltrating in the metastatic organ, the transcriptional profiles of neutrophils were analyzed by RNA sequencing. 4T1 cells were injected into the fourth mammary fat pads of female syngeneic BALB/cJ mice (8-week-old, n = 3). At day 10 (pre-metastatic stage), the mice were euthanized and then CD45+CD11b+Ly6G<high>Ly6C<med> neutrophils from bone marrow (BM), peripheral blood (PB) and lung were isolated by fluorescence-activated cell sorting. Total RNA was isolated from neutrophils using the miRNeasy Mini kit (Qiagen) and the transcriptional profiles of neutrophils were analyzed by RNA sequencing

2020-07-24 | E-MTAB-9128 | biostudies-arrayexpress

Cytokine profile of mature WT bone marrow-derived dendritic cells and fascin1 knockout bone marrow-derived dendritic cells

Project description:Cytokine profile of mature WT bone marrow-derived dendritic cells and fascin1 knockout bone marrow-derived dendritic cells

| PRJNA729095 | ENA

Bone Marrow Transplantation in Treating Patients With Hematologic Cancer

Project description:RATIONALE: Radiation therapy uses high-energy x-rays to damage cancer cells. Drugs used in chemotherapy use different ways to stop cancer cells from dividing so they stop growing or die. Combining chemotherapy with bone marrow transplantation may allow the doctor to give higher doses of chemotherapy drugs and kill more tumor cells. PURPOSE: Phase II trial to study the effectiveness of bone marrow transplantation in treating patients who have hematologic cancer.

| 2004880 | ecrin-mdr-crc

Mouse Bone Marrow Proteome Profiling

Project description:Hematopoietic stem cells give rise to all blood lineages, can fully re-populate the bone marrow, and easily outlive the host organism. To better understand how stem cells remain fit during aging, we analyzed the proteome of hematopoietic stem and progenitor cells.

2019-05-23 | MSV000083845 | MassIVE

Bone marrow niche

Project description:Bone marrow niche

| PRJNA429031 | ENA

Transcriptome profiling of adult mouse bone marrow endothelial cells

Project description:We performed RNA sequencing analyses of adult mouse bone marrow endothelial cells. Especially, we investigated gene expression profiling of endothelial cells before and after lethal irradiation or hematopoietic cell depletion. We also analyzed mouse bone marrow endothelial cell subtypes, Apln+ and diaphyseal endothelial cells. Whole bone marrow cells, lineage negative hematopoietic stem and progenitor cells, Lin- Sca1+ cKit+ cells were used as controls for the differential gene expression analyses.

2019-11-14 | GSE115422 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data