Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing of MDA-LM2 and MDA-Parental cells

ABSTRACT: RNA sequencing of MDA-LM2 and MDA-Parental cells

PROVIDER: PRJNA674896 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12995625.fastq.gz	Fastqsanger.gz
	SRR12995626.fastq.gz	Fastqsanger.gz
	SRR12995627.fastq.gz	Fastqsanger.gz
	SRR12995628.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

RNA sequencing of MDA-LM2 and MDA-Parental cells

Project description:We used RNA sequencing to compare MDA-MB-231 cells to their higly metastatic MDA-LM2 derivatvies.

2021-03-30 | GSE160953 | GEO

Analysis of HNRNPC Interactome in MDA-MB231 parental and LM2 cells

Project description:To define and compare the interactomes of the RNA binding protein HNRNPC in poorly vs. efficiently metastatic breast adenocarcinoma cells, we carried out immunoprecipitation of endogenous HNRNPC from parental MDA-MB231 cells vs. its highly metastatic isogenic derivate, the MDA-MB231-LM2 cells. We used a non-specific MOUSE IgG IP from each line as control. Each IP was performed in triplicate, and analysed by LC-MS/MS, on a Thermo Q-Exactive-plus instrument.

2023-02-19 | PXD029560 | Pride

RNA sequencing of SNRPA1 knockdown in MDA-LM2 cells

Project description:RNA sequencing of SNRPA1 knockdown in MDA-LM2 cells

| PRJNA674893 | ENA

RNA sequencing of SNRPB2 knockdown in MDA-LM2 cells

Project description:RNA sequencing of SNRPB2 knockdown in MDA-LM2 cells

| PRJNA674895 | ENA

Next generation sequencing analysis of transcriptomes in MDA-MB-231 and LM2-4175 cell lines

Project description:LM2-4175 cell line was originally selected from MDA-MB-231,but has more aggressive characteristics in invasion, migration and metastasis. In addition, LM2 cell line specifically metastasizes to lung. To understand the melecular mechanisms of lung metastasis in breast cancer,we analyzed the RNA-seq data of MDA-MB-231 and LM2-4175 cell lines.

2019-07-31 | GSE124380 | GEO

Differential transcript stability measurements in MDA-MB-231 vs. MDA-LM2 cells

Project description:We performed whole-genome stability measurements for MDA-MB-231 and its highly metastatic derivative MDA-LM2. Our goal was to identify post-transcriptonal regulons that are deregulated en route to higher metastatic capacity.

2014-07-24 | GSE49608 | GEO

SRSF1 HITS-CLIP in MDA-LM2

Project description:To identify SRSF1 binding sites on RNAs, we performed HITS-CLIP of endogenous SRSF1 in MDA-LM2 cells

2019-12-26 | GSE131745 | GEO

Lung metastatic derivative LM2 cells with and without miR-335

Project description:the LM2 breast cancer cell line is an in vivo derived line from the MDA-MB-231 parental line. this LM2 line has been transduced either with a short hairpin control or miR-335 expression vector. Keywords: breast cancer, metastasis, miRNA

2008-01-01 | GSE9586 | GEO

RNA sequencing of SNRPA1 and SNRPB knockdown in MDA-LM2 cells

Project description:RNA sequencing of SNRPA1 and SNRPB knockdown in MDA-LM2 cells

| PRJNA674894 | ENA

SRSF1 HITS-CLIP in MDA-LM2

Project description:SRSF1 HITS-CLIP in MDA-LM2

| PRJNA544632 | ENA