Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mine drainage metagenome

ABSTRACT: Desulfurivibrio spp. drives sulfur-oxidizing Sb(V) reduction process in antimony contaminated regions

PROVIDER: PRJNA678566 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13064100_1.fastq.gz	Fastqsanger.gz
	SRR13064100_2.fastq.gz	Fastqsanger.gz
	SRR13064101_1.fastq.gz	Fastqsanger.gz
	SRR13064101_2.fastq.gz	Fastqsanger.gz
	SRR13064102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 184

Similar Datasets

mine drainage metagenome

Project description:Sb tailings Raw sequence reads

| PRJNA307308 | ENA

Proteomic study of Acinetobacter johnsonii JH7 under Sb(III) stress

Project description:Antimony (Sb) pollution, especially released from mining activities has already been widely recognized as a global concern. To gauge strategies for the remediation of an Sb-contaminated ecosystem, the exploration of native microbiota Sb(III) resistance mechanism is of great significance. Acinetobacter is one of the bacterial genera abundantly thriving in Sb(III)-contaminated environments, the scientific elaboration of Sb(III)-resistance mechanisms of Acinetobacter is imperative. Proteomics experiment was performed (Acinetobacter johnsonii JH7 with and without Sb(III) addtion) to probe its pattern of proteins change under Sb(III) stress. We hope that the mechanisms of Sb(III) resistance of Acinetobacter could be revealed by using iTRAQ this time.

2020-01-20 | PXD017203 |

mine drainage metagenome

Project description:Sphalerite bioleaching process Raw sequence reads

| PRJNA356679 | ENA

mine drainage metagenome

Project description:Acid Mine Drainage contaminated watershed Metagenome

| PRJNA255485 | ENA

mine drainage metagenome

Project description:16S amplicon sequencing of hydrocarbon-contaminated mine tailings

| PRJNA270841 | ENA

mine drainage metagenome

Project description:Metagenome-assembled genomes (MAGs) were retrieved from this rare earth elements acid mine drainage contaminated river

| PRJNA675967 | ENA

Project description:Biological sulfur oxidation mediated arsenate reduction, a key process in arsenic-contaminated habitats

| PRJNA989741 | ENA

Effects of arbuscular mycorrhizal fungi on Pteris cretica L var. nervosa fronds antimony enrichment, morphology and proteome changes during antimony phytoremediation

Project description:Pteris cretica L var. nervosa is one of the dominent fern species at antimony mining area where arbuscular mycorrhizal fungi can be found as a symbiosis. The effect of AMF on fern exposed to long-term excessive Sb was pooly understood. The project applied this fern co-cultivting with or withour AMF under different concentration of Sb in soil for charicterising Sb phytomediation ability of it along with the effect by AMF symbiosis.

2024-01-19 | PXD012678 | Pride

The response to thiosulfate availability in Hyphomicrobium denitrificans

Project description:Many sulfur-oxidizing prokaryotes oxidize sulfur compounds through a combination of initial extracytoplasmic and downstream cytoplasmic reactions. Facultative sulfur oxidizers adjust transcription to sulfur availability. While sulfur-oxidizing enzymes and transcriptional repressors have been extensively studied, sulfur import into the cytoplasm and how regulators sense external sulfur are poorly understood. Addressing this gap, we show that SoxT1A and SoxT1B, which resemble YeeE/YedE-family thiosulfate transporters and are encoded alongside sulfur oxidation and transcriptional regulation genes, fulfill these roles in the Alphaproteobacterium Hyphomicrobium denitrificans. RT-qPCR provided initial evidence that SoxT1A and SoxT1B from H. denitrificans may be intricate components of the oxidation pathway and/or involved in its transcriptional regulation. Here, we extend these analyses with genome-wide mRNA-Seq data for the reference strain, comparing transcription in the absence and presence of 2 mM thiosulfate

2024-11-14 | GSE278992 | GEO

Project description:Sb Reduction Bioreactors

| PRJNA680856 | ENA