Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Capsicum

ABSTRACT: Local Capsicum cultivars from India, representing three species C. chinense, C. frutescens and C. annuum.

PROVIDER: PRJNA679780 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12963500_1.fastq.gz	Fastqsanger.gz
	SRR12963500_2.fastq.gz	Fastqsanger.gz
	SRR12963501_1.fastq.gz	Fastqsanger.gz
	SRR12963501_2.fastq.gz	Fastqsanger.gz
	SRR12963502_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 56

Similar Datasets

Identification and characterization of CC-AMP1-like and CC-AMP2-like peptides in Capsicum spp.

Project description:Antimicrobial peptides (AMPs) are compounds with a variety of bioactive properties. Especially promising are their antibacterial activities, often towards drug-resistant pathogens. Across different AMP sources, AMPs expressed within plants are relatively underexplored, with a limited number of plant AMP families identified. Recently, we identified the novel AMPs CC-AMP1 and CC-AMP2 in ghost pepper plants (Capsicum chinense x frutescens), exerting promising antibacterial activity and not classifying into any known plant AMP family. Herein, AMPs related to CC-AMP1 and CC-AMP2 were identified within both Capsicum annuum and Capsicum baccatum. Targeted MS/MS experiments were performed to determine peptide sequences, guided by in silico AMP sequence predictions.

2024-01-27 | PXD041035 | Pride

Capsicum annuum x Capsicum frutescens

Project description:Capsicum annuum x Capsicum frutescens Map

| PRJNA80623 | ENA

Capsicum annuum x Capsicum chinense

Project description:Capsicum annuum x Capsicum chinense Map

| PRJNA164769 | ENA

Capsicum annuum x Capsicum chinense

Project description:Capsicum annuum x Capsicum chinense Map

| PRJNA164771 | ENA

Capsicum annuum x Capsicum chinense

Project description:Capsicum annuum x Capsicum chinense Map