Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Characterization of the complete chloroplast genome of Polyspora tiantangensis (Theaceae), an endemic and endangered species in southwestern China

PROVIDER: PRJNA680229 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13108242_1.fastq.gz	Fastqsanger.gz
	SRR13108242_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:The complete chloroplast genome of Polyspora chrysandra (Theaceae)

| PRJNA725428 | ENA

Project description:The complete chloroplast genome of rhubarb (Rheum tanguticum), an endangered medicinal plant endemic to China

| PRJNA592023 | ENA

Lonicera sp. breed:Lonicera microphylla

Project description:Characterization of the complete chloroplast genome of an endemic species of Honeysuckle in China, Lonicera microphylla (Caprifoliaceae)

| PRJNA1142169 | ENA

Project description:Characterization of the complete chloroplast genome of a Chinese endangered species Cymbidium lancifolium

| PRJNA788783 | ENA

Project description:Characterization of the complete chloroplast genome Camellia tienii (Theaceae) and its relatives

| PRJNA1081179 | ENA

Project description:Characterization of the complete plastid genome of Gypsophila huashanensis, an endemic species in China.

| PRJNA895000 | ENA

Project description:The complete chloroplast genome of Artocarpus tonkinensis, an endangered species of genus Artocarpus native to China

| PRJNA738269 | ENA

Project description:The complete chloroplast genome of Lagerstroemia balansae, an endangered species of genus Lagerstroemia native to China

| PRJNA673929 | ENA

The effects of permethrin on the transcriptome of an endangered fish, the delta smelt (Hypomesus transpacificus)

Project description:Research on the effects of contaminants on fishes is often conducted on well-studied model test species, whose responses may be different than those of species of conservation concern. We used an oligonucleotide microarray to examine the effects of permethrin, a widely used pyrethroid pesticide, on a critically endangered fish species endemic to Northern California, the delta smelt (Hypomesus transpacificus). These results demonstrate the effects of a widely used pesticide on a sensitive fish species at concentrations below those that affect model test species.

2015-09-01 | GSE67521 | GEO

Ammonia exposures on the endangered delta smelt

Project description:The delta smelt (Hypomesus transpacificus) is a pelagic fish species endemic to the Sacramento-San Joaquin Estuary in Northern California, listed as endangered under both the USA Federal and Californian State Endangered Species Acts and acts as an indicator of ecosystem health in its habitat range. Interrogative tools are required to successfully monitor effects of contaminants upon the delta smelt, and to research potential causes of population decline in this species. We used microarray technology to investigate genome-wide effects in 57-day old larvae after a 4-day exposure to ammonia; one of multiple contaminants arising from wastewater treatment plants and agricultural runoff. Genomic assessments were carried out between larvae exposed to 10 mg/L total ammonium; the lowest observed effect concentration (LOEC), and controls.

2011-05-05 | GSE29089 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data