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Triticum turgidum subsp. durum

ABSTRACT: Quant-Seq vrn1 and vrn1ful2 mutants. vrn1 Vegetative samples.

PROVIDER: PRJNA681065 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13171400.fastq.gz	Fastqsanger.gz
	SRR13171401.fastq.gz	Fastqsanger.gz
	SRR13171402.fastq.gz	Fastqsanger.gz
	SRR13171399.fastq.gz	Fastqsanger.gz

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Triticum turgidum subsp. durum

Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1ful2 Vegetative samples.

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Triticum turgidum subsp. durum

Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1ful2 Post DR samples.

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Triticum turgidum subsp. durum

Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1ful2 Terminal Spikelet samples.

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Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1ful2 Double ridge samples.

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Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1 Double ridge samples.

| PRJNA681067 | ENA

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Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1 Post DR samples.

| PRJNA681097 | ENA

Triticum turgidum subsp. durum

Project description:Quant-Seq vrn1 and vrn1ful2 mutants. vrn1 Terminal Spikelet samples.

| PRJNA681099 | ENA

TdERF1, an ethylene response factor associated with dehydration responses in durum wheat (Triticum turgidum L. subsp. durum).

Project description:Water deficit and increasing salinization reduce productivity of wheat, the leading crop for human diet. While the complete genome sequence of this crop has not been deciphered, a BAC library screening allowed the isolation of TdERF1, the first ethylene response factor gene from durum wheat. This gene is putatively involved in mediating salt stress tolerance and its characterization provides clues toward understanding the mechanisms underlying the adaptation/tolerance of durum wheat to suboptimal growth conditions. TdERF1 expression is differentially induced by high salt treatment in 2 durum wheat varieties, the salt-tolerant Grecale (GR) and the salt-sensitive Om Rabiaa (OR). To further extend these findings, we show here that the expression of this ERF is correlated with physiological parameters, such as the accumulation of osmo-regulators and membrane integrity, that discriminate between the 2 contrasted wheat genotypes. The data confirm that GR and OR are 2 contrasted wheat genotypes with regard to salt-stress and show that TdERF1 is also induced by water stress with an expression pattern clearly discriminating between the 2 genotypes. These findings suggest that TdERF1 might be involved in responses to salt and water stress providing a potential genetic marker discriminating between tolerant and sensitive wheat varieties.

| S-EPMC4883918 | biostudies-other

Triticum turgidum subsp. durum

Project description:RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways

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Transcriptional Regulation of Metabolic and Cellular Processes in Durum Wheat (Triticum turgidum subsp. durum) in the Face of Temperature Increasing.

Project description:The Yaqui Valley, Mexico, has been historically considered as an experimental field for semiarid regions worldwide since temperature is an important constraint affecting durum wheat cultivation. Here, we studied the transcriptional and morphometrical response of durum wheat at an increased temperature (+2 °C) for deciphering molecular mechanisms involved in the thermal adaptation by this crop. The morphometrical assay showed a significant decrease in almost all the evaluated traits (shoot/root length, biovolume index, and dry/shoot weight) except in the dry root weight and the root:shoot ratio. At the transcriptional level, 283 differentially expressed genes (DEGs) were obtained (False Discovery Rate (FDR) ≤ 0.05 and |log2 fold change| ≥ 1.3). From these, functional annotation with MapMan4 and a gene ontology (GO) enrichment analysis with GOSeq were carried out to obtain 27 GO terms significantly enriched (overrepresented FDR ≤ 0.05). Overrepresented and functionally annotated genes belonged to ontologies associated with photosynthetic acclimation, respiration, changes in carbon balance, lipid biosynthesis, the regulation of reactive oxygen species, and the acceleration of physiological progression. These findings are the first insight into the regulation of the mechanism influenced by a temperature increase in durum wheat.

| S-EPMC8703274 | biostudies-literature

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