Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Listeria monocytogenes infected mouse liver RNA sequencing

ABSTRACT: Listeria monocytogenes infected mouse liver RNA sequencing

PROVIDER: PRJNA681882 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13176716.fastq.gz	Fastqsanger.gz
	SRR13176717.fastq.gz	Fastqsanger.gz
	SRR13176718.fastq.gz	Fastqsanger.gz
	SRR13176719.fastq.gz	Fastqsanger.gz
	SRR13176720.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Gene expression profile in peritoneal macrophage infected with Listeria monocytogenes

Project description:Several Toll-like receptors are activated by Listeria monocytogenes infection, resulting in the activation of MyD88 dependent signaling pathway. However, the negative role of MyD88 in gene expresson is unclear. To address this, we performed microarray analysis of mRNAs from WT or MyD88-/- peritoneal macrophages infected with Listeria monocytogenes.

2014-06-29 | GSE52115 | GEO

Listeria monocytogenes infected mouse liver RNA sequencing

Project description:IFN-Is have a detrimental effect in the case of Listeria monocyteogenes (Lm) infection. Previously it has been shown that Ifnar-/- mice are protected from the infection induced death. However, we have found that IRF9, a downstream component of the IFNAR signalling, has a role in addition to the IFNAR signalling in protecting the mice from Lm infection. This is due to Irf9-/- mice being more protected than Ifnar-/- mice. Among other hypotheses, we think that the recently shown role of Irf9 in glucose metabolism can be effective in this additional protection. Furthermore, our metabolic screens point to similar direction. Therefore, we would like to measure the differential gene expression pattern in livers from uninfected and 1 day infected Wt, Irf9-/- and Ifnar-/- mice.

2021-06-09 | GSE162448 | GEO

Transcriptome (RNA-seq) of primary mouse hepatocytes (PMH) cells non-infected (NI) or infected (Inf.) with the pathogen Listeria monocytogenes (strain 10403S)

Project description:Comparisons of gene expression profiles PMH infected or not by the bacterium Listeria monocytogenes (strain 10403S) for 72 hours and analysed by RNA-seq

2021-09-29 | GSE184808 | GEO

Transcriptome Sequencing of mice eosinophils upon Listeria monocytogenes (L.m.) infection

Project description:Mature eosinophils were differentiated from mouse bone marrow progenitors We performed transcriptome sequencing on Listeria monocytogenes infected eosinophils and resting eosinophils to shed light on the transcriptional changes of cytokines and chemokines.

2024-01-31 | GSE220480 | GEO

Expression data from macrophages of E-selectin+/+ and E-selectin-/- mouse infected with Listeria monocytogenes in vivo on day3

Project description:We used microarrays to detail the global gene expression in peritoneal macrophages (PM) from E-selectin+/+ and E-selectin-/- mouse infected with Listeria Monocytogenes in vivo on day3

2018-01-25 | GSE90808 | GEO

Expression data from CCR2+ and CCR2- splenic marophages from C57BL6 mouse infected with Listeria Monocytogenes in vivo on day3

Project description:We used microarrays to detail the global gene expression in CCR2+ and CCR2- spenic macrophages (SM) sorted from C57BL6 mouse infected with Listeria Monocytogenes in vivo on day3

2019-01-01 | GSE97790 | GEO

Methylome of of HepG2 cells uninfected ("Cont") or infected with the pathogen Listeria monocytogenes ("Inf") by Methyl-binding domain-sequencing (MBD-Seq/MethylCap-Seq)

Project description:We report the partial methylome (CG-rich regions) of human hepatocytes (HepG2) infected or not by the bacterium Listeria monocytogenes

2021-12-31 | GSE53293 | GEO

Transcriptome (RNA-seq) of HepG2 cells non-infected (NI) or infected (Inf.) with the pathogen Listeria monocytogenes (strain EGD-e)

Project description:Comparisons of gene expression profiles of human hepatocytes (HepG2) infected or not by the bacterium Listeria monocytogenes (strain EGD-e) for 72 hours and analysed by RNA-seq

2021-09-25 | GSE184697 | GEO

Transcriptome (RNA-seq) of Huh7 cells non-infected (NI) or infected (Inf.) with the pathogen Listeria monocytogenes (strain EGD-e)

Project description:Comparisons of gene expression profiles of human hepatocytes (Huh7) infected or not by the bacterium Listeria monocytogenes (strain EGD-e) for 72 hours and analysed by RNA-seq

2021-09-26 | GSE184729 | GEO

Transcriptome analysis of Listeria monocytogenes infected bone marrow derived macrophages with or without DEAD-box helicase DDX3X

Project description:Bone marrow derived macrophages were infected with Listeria monocytogenes for 4 hours. We investigated differently expressed genes in the absence of DDX3X upon infection and also in steady state conditions.

2018-10-17 | GSE86591 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data