Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptomyces chrestomyceticus strain:TBRC 1925

ABSTRACT: Streptomyces chrestomyceticus strain:TBRC 1925 Genome sequencing and assembly

PROVIDER: PRJNA682011 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Streptomyces chrestomyceticus

Project description:Streptomyces chrestomyceticus Genome sequencing

| PRJNA1295772 | ENA

Streptomyces chrestomyceticus strain:ADP4

Project description:Streptomyces chrestomyceticus strain:ADP4 Genome sequencing and assembly

| PRJNA1007925 | ENA

Streptomyces chrestomyceticus

Project description:Streptomyces chrestomyceticus overview

| PRJNA707628 | ENA

Streptomyces chrestomyceticus JCM 4735

Project description:Genome sequencing of Streptomyces chrestomyceticus JCM 4735

| PRJDB991 | ENA

Streptomyces chrestomyceticus BCC24770 Timecourse Proteomics

Project description:The proteomes of mycelia in the fermentations of Streptomyces chrestomyceticus BCC24770. The fermentations media were TSBY, GYM and AM4.

2022-03-23 | MSV000089117 | MassIVE

Natural constitutive promoters from Actinoplanes siamensis TBRC 4237 enable high-level heterologous gene expression in Streptomyces coelicolor

Project description:Activation of cryptic biosynthetic gene clusters (BGCs) in actinomycetes often requires strong and reliable promoters, yet native promoters from rare actinomycetes remain scarce. Here, we used transcriptome analysis of Actinoplanes siamensis TBRC 4237 to identify highly expressed genes and selected 22 upstream regions as candidate constitutive promoters. Their activities were evaluated in Streptomyces coelicolor M1146 using indigoidine synthetase and latex-clearing protein (LCP) as heterologous reporters. Thirteen promoters drove indigoidine production at levels exceeding those of kasOp* and ermEp*, the widely used strong constitutive promoters in Streptomyces. Several promoters also yielded robust LCP activity, with promoter 650A achieving the highest expression across both reporter systems. Motif analysis showed no clear correlation between predicted -10/-35 elements and promoter strength, indicating additional regulatory features. These natural promoters provide valuable genetic parts for heterologous expression, BGC activation, and pathway refactoring in actinomycetes.

2026-02-25 | GSE320076 | GEO

Ligilactobacillus saerimneri strain:TBRC 5746

Project description:Ligilactobacillus saerimneri strain:TBRC 5746 Genome sequencing and assembly

| PRJNA913640 | ENA

Gordonia asplenii strain:TBRC 11910

Project description:Gordonia asplenii strain:TBRC 11910 Genome sequencing and assembly

| PRJNA627306 | ENA

Streptomyces secondary metaboites - strain M1

Project description:In this study, we describe the isolation and identification of Streptomyces isolates collected from traditional medicinal plants’ rhizosphere during a campaign in Hamedan Province, Iran. Traditional medicinal plants represent a rich and unique source for the isolation of Streptomyces and new antimicrobial compounds. This strain was isolated from the rhizosphere of Helichrysum rubicundum

2024-01-04 | PXD042019 | Pride

Effects of cAMP supplementation on the transcriptome of Streptomyces coelicolor M1146 strain

Project description:To identify unique gene expression in cAMP supplemented Streptomyces coelicolor M1146 strain. The genes with different gene expression might be key genes to understand the effects of cAMP supplementation on the transcriptome of Streptomyces coelicolor M1146.

2020-11-27 | GSE158811 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data