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Transcriptome profiling in swine macrophages infected with African swine fever virus at single-cell resolution

ABSTRACT: Transcriptome profiling in swine macrophages infected with African swine fever virus at single-cell resolution

PROVIDER: PRJNA706032 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13833837_1.fastq.gz	Fastqsanger.gz
	SRR13833837_2.fastq.gz	Fastqsanger.gz
	SRR13833838_1.fastq.gz	Fastqsanger.gz
	SRR13833838_2.fastq.gz	Fastqsanger.gz
	SRR13833839_1.fastq.gz	Fastqsanger.gz

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Transcriptome profiling in swine macrophages infected with African swine fever virus at single-cell resolution

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Project description:Purpose: This goal of this study was to explore the host transcriptomic responses in African swine fever virus experimentally infected pigs using RNA-Sequencing. Methods: RNAs acquired from ten different organ tissue samples were sequenced. Sequencing reads were preprocessed, aligned with the reference genome, assembled and expressions were estimated through bioinformatics approaches. Result: Several uprugulated DEGs were identified. Conclusion: We found important candidate genes and pathways for further testing in African swine fever virus infection in pig.

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