Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Comamonas denitrificans strain:MM2021_4

ABSTRACT: Comamonas denitrificans strain:MM2021_4 Genome sequencing and assembly

PROVIDER: PRJNA707565 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Whole gene transcriptomic analysis of testosterone/17 beta-estradiol degrading in Comamonas testosteroni JLU460ET

Project description:Purpose: find testosterone/17 beta-estradiol degrading genes in strain Comamonas testosteroni JLU460ET

2021-09-17 | GSE184154 | GEO

Comamonas suwonensis strain:EJ-4 | breed:Comamonas

Project description:Comamonas suwonensis strain:EJ-4 | breed:Comamonas Genome sequencing and assembly

| PRJNA622651 | ENA

The response to thiosulfate availability in Hyphomicrobium denitrificans

Project description:Many sulfur-oxidizing prokaryotes oxidize sulfur compounds through a combination of initial extracytoplasmic and downstream cytoplasmic reactions. Facultative sulfur oxidizers adjust transcription to sulfur availability. While sulfur-oxidizing enzymes and transcriptional repressors have been extensively studied, sulfur import into the cytoplasm and how regulators sense external sulfur are poorly understood. Addressing this gap, we show that SoxT1A and SoxT1B, which resemble YeeE/YedE-family thiosulfate transporters and are encoded alongside sulfur oxidation and transcriptional regulation genes, fulfill these roles in the Alphaproteobacterium Hyphomicrobium denitrificans. RT-qPCR provided initial evidence that SoxT1A and SoxT1B from H. denitrificans may be intricate components of the oxidation pathway and/or involved in its transcriptional regulation. Here, we extend these analyses with genome-wide mRNA-Seq data for the reference strain, comparing transcription in the absence and presence of 2 mM thiosulfate

2024-11-14 | GSE278992 | GEO

Comamonas resistens strain:Y6

Project description:Comamonas resistens strain:Y6 Genome sequencing and assembly

| PRJNA981659 | ENA

Comamonas thiooxydans strain:D4

Project description:Comamonas thiooxydans strain:D4 Genome sequencing and assembly

| PRJNA218487 | ENA

Comamonas thiooxydans strain:QT12

Project description:Comamonas thiooxydans strain:QT12 Genome sequencing and assembly

| PRJNA377849 | ENA

Comamonas suwonensis strain:EJ4

Project description:Comamonas suwonensis strain:EJ4 Genome sequencing and assembly

| PRJNA623706 | ENA

Comamonas thiooxydans strain:JC12

Project description:Comamonas thiooxydans strain:JC12 Genome sequencing and assembly

| PRJNA217890 | ENA

Comamonas kerstersii strain:202149

Project description:Comamonas kerstersii strain:202149 Genome sequencing and assembly

| PRJNA352161 | ENA

Comamonas thiooxydans strain:KY3

Project description:Comamonas thiooxydans strain:KY3 Genome sequencing and assembly

| PRJNA280733 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data