Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gossypium arboreum

ABSTRACT: Wuhan university Raw sequence reads

PROVIDER: PRJNA712929 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13925298_1.fastq.gz	Fastqsanger.gz
	SRR13925298_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Gossypium arboreum

Project description:Gossypium arboreum Raw sequence reads

| PRJNA1081489 | ENA

Gossypium arboreum

Project description:Gossypium arboreum Raw sequence reads

| PRJNA712876 | ENA

Gossypium arboreum

Project description:Gossypium arboreum raw sequence reads

| PRJNA713422 | ENA

Gossypium arboreum

Project description:Gossypium arboreum Raw sequence reads

| PRJNA349094 | ENA

Gossypium arboreum

Project description:Gossypium arboreum Raw sequence reads

| PRJNA837035 | ENA

Gossypium arboreum

Project description:Gossypium arboreum sRNA sequence reads

| PRJNA670313 | ENA

High-throughput sequencing of small RNAs in Gossypium arboreum

Project description:Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a demonstrated and important role in plant development, stress responses and pathogen resistance. In this work, we used a deep sequencing approach (Sequencing-By-Synthesis, or SBS) to develop sequence resources of small RNAs from different Gossypium arboreum tissues (leaves, flowers and fibers). The high depth of the resulting datasets enabled us to examine in detail critical small RNA features as size distribution, tissue-specific regulation and sequence conservation between different organs in this species. We also developed database resources and a dedicated website (http://smallrna.udel.edu/) with computational tools for allowing other users to identify new miRNAs or siRNAs involved in specific regulatory pathways, verify the degree of conservation of these sequences in other plant species and map small RNAs on genes or larger regions of the maize genome under study.

2011-05-10 | GSE28965 | GEO

Gossypium arboreum cultivar:Shixiya1

Project description:Gossypium arboreum cultivar:Shixiya1 Raw sequence reads

| PRJNA312425 | ENA