Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Soil ammonia-oxidizing microorganisms

PROVIDER: PRJNA716142 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14026727_1.fastq.gz	Fastqsanger.gz
	SRR14026727_2.fastq.gz	Fastqsanger.gz
	SRR14026728_1.fastq.gz	Fastqsanger.gz
	SRR14026728_2.fastq.gz	Fastqsanger.gz
	SRR14026729_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Project description:Soil ammonia-oxidizing microorganisms (comammox)

| PRJNA716157 | ENA

Project description:Soil ammonia-oxidizing microorganisms (AOB)

| PRJNA716156 | ENA

Project description:Ammonia-oxidizing microorganisms

| PRJNA868943 | ENA

Project description:ammonia oxidizing microorganisms

| PRJNA1211822 | ENA

soil metagenome

Project description:Ammonia-oxidizing microorganisms in banana soil (PRJCA028474)

| PRJDB32189 | ENA

Evaluation of Edaphic Microbial Ammonium Oxidizing Communities during a Yellow Potato Cycle Culture

Project description:This study evaluated the ammonium oxidizing communities (COA) associated with a potato crop (Solanum phureja) rhizosphere soil in the savannah of Bogotá (Colombia) by examining the presence and abundance of amoA enzyme genes and transcripts by qPCR and next-generation sequence analysis. amoA gene abundance could not be quantified by qPCR due to problems inherent in the primers; however, the melting curve analysis detected increased fluorescence for Bacterial communities but not for Archaeal communities. Transcriptome analysis by next-generation sequencing revealed that the majority of reads mapped to ammonium-oxidizing Archaea, suggesting that this activity is primarily governed by the microbial group of the Crenarchaeota phylum. In contrast,a lower number of reads mapped to ammonia-oxidizing bacteria.

2018-08-06 | GSE71824 | GEO

Soil ammonia oxidizing microorganisms in alfalfa fields

Project description:Ammonia oxidizing microorganisms Raw sequence reads

| PRJNA1173952 | ENA

Project description:Soil ammonia-oxidizing archaea

| PRJNA1329187 | ENA

Project description:Soil ammonia-oxidizing bacteria

| PRJNA1329207 | ENA

Transcriptome sequencing data sets of a marine ammonia-oxidizing archaeon Nitrosopumilus zosterae NM25 to hydrogen peroxide

Project description:Marine ammonia-oxidizing archaea are known to lack the catalase gene that functions as a scavenger at high concentrations of hydrogen peroxide. Therefore, nearly isolated ammonia-oxidizing archaea require the addition of a hydrogen peroxide scavenger to their culture medium, despite being aerobic. To understand the transcriptomic response to hydrogen peroxide stress, we performed RNA-Seq analysis under two different conditions: one without the addition of a hydrogen peroxide scavenger and one with the addition of a hydrogen peroxide scavenger as a control.

2026-03-25 | GSE320517 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data