Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bulk RNA-sequencing of fibroblasts isolated by FACS from normal human prostate

ABSTRACT: Bulk RNA-sequencing of fibroblasts isolated by FACS from normal human prostate

PROVIDER: PRJNA723005 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14274907.fastq.gz	Fastqsanger.gz
	SRR14274907_1.fastq.gz	Fastqsanger.gz
	SRR14274907_2.fastq.gz	Fastqsanger.gz
	SRR14274908.fastq.gz	Fastqsanger.gz
	SRR14274908_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 27

Similar Datasets

Bulk RNA-sequencing of fibroblasts isolated by FACS from normal human prostate

Project description:Differential expression of prostatic fibroblasts were determined using RNA-sequencing of FACS sorted fibroblasts from normal human prostate transition and peripheral.

2021-07-07 | GSE172347 | GEO

Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates

Project description:Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates

| PRJNA481585 | ENA

Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates

Project description:Differential expression of prostatic cell types were determined using RNA-sequencing of FACS sorted cell types from normal human prostates. The cell types sequenced were basal epithelia, luminal epithelia, a heterogeneous fibromuscular stroma and a poorly understood "other" epithelial population.

2018-12-04 | GSE117271 | GEO

Fibroblasts: Normal fibroblasts vs. Carcinoma-associated fibroblasts

Project description:Fibroblasts: Normal fibroblasts vs. Carcinoma-associated fibroblasts

| PRJNA690801 | ENA

Bulk RNA-sequencing of FACS isolated human fetal lung, intestine, and kidney endothelial cells

Project description:Adult endothelial cells (ECs) are known to possess organ-specific gene expression, morphology and function, but whether organ-specific EC gene expression is present during human development is not known. Here, we used bulk RNA-sequencing (RNA-seq) to interrogate the developing human intestine, lung, and kidney in order to identify organ-enriched EC-gene signatures. FACS was used to isolate EC (CD31+CD144+, n=13) and non-EC (CD31-CD144-, n=16) populations from these three organs, profiling at least 4 biological replicates for each organ system. The biological specimens profiled were between 11-20 gestational weeks. We also sequenced cultured human umbilical vein endothelial cells (HUVECs) via bulk RNAseq. Computational approaches were used to identify organ-specific EC-enriched gene signatures across human fetal lung, intestine, and kidney ECs.

2020-12-20 | E-MTAB-9372 | biostudies-arrayexpress

Bulk RNA-sequencing of mRNA from Sertoli cells isolated by a novel single cell suspension protocol and FACS-sorting

Project description:Analysis of bulk-mRNA from Sertoli cells of pre-puberal, puberal and young adult mice. We have developed a novel method for preparation of the single cell suspension from seminiferous tubules and subsequent Sertoli-cell specific staining and FACS-sorting, which takes less than 2 hours.

2022-08-23 | E-MTAB-11895 | biostudies-arrayexpress

Single Cell RNA-sequencing of cell types isolated by FACS from normal human prostates

Project description:Single-cell RNA-sequencing was conducted on specific cell types and heterogeneous viable cells (sorted by FACS) in order to determine a cellular atlas of the normal human prostate.

2018-12-04 | GSE117403 | GEO

Normal murine fibroblasts from the colon

Project description:Normal murine fibroblasts from the colon

| PRJNA1119969 | ENA

Overexpression of circCUL2 in normal fibroblasts

Project description:Overexpression of circCUL2 in normal fibroblasts

| PRJNA722732 | ENA

Bulk ATAC-seq data of fibroblasts from healthy mouse tissues

Project description:Bulk ATAC-seq was performed on fibroblasts from 8 different healthy mouse tissues such as bone, epididymal and inguinal fat pads, omentum, liver, lung and lymph node. This data was used to examine tissue specific chromatin landscapes in fibroblasts.

2021-05-04 | E-MTAB-10316 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data