Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Studies of ileum microbial diversity and metabonomics on sheep

PROVIDER: PRJNA744748 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15092800_1.fastq.gz	Fastqsanger.gz
	SRR15092800_2.fastq.gz	Fastqsanger.gz
	SRR15092801_1.fastq.gz	Fastqsanger.gz
	SRR15092801_2.fastq.gz	Fastqsanger.gz
	SRR15092802_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Project description:Studies of cecum microbial diversity ang metabonomics on sheep

| PRJNA944130 | ENA

Project description:Studies of ruminal microbial diversity on Tibetan sheep

| PRJNA801776 | ENA

Project description:Global studies of rumen microbial diversity of Tan-sheep

| PRJNA1072003 | ENA

Transcription profiling of sheep terminal ileum with 3 defined groups of MAP infection

Project description:Comparative expression profiles of 3 defined groups of Mycobacterium avium subspecies paratuberculosis (MAP) infected terminal ileum from sheep. Defined by histopathlogy and IS900 real-time PCR as multibacillary, paucibacillary and asymptomatic sheep. Six sheep per group provided biological and technical replicates on the RIGUA custom array (Watkins et al., 2008).

2009-05-15 | E-TABM-487 | biostudies-arrayexpress

The Impact of Environment on Microbial Diversity and Global Transcriptional Responses in the Developing Pig Gut

Project description:The study investigated the impact of environment on the composition of the gut microbiota and mucosal immune development and function at gut surfaces in early and adult life. Piglets of similar genotype were reared in indoor and outdoor environments and in an experimental isolator facility. Mucosa-adherent microbial diversity in the pig ileum was characterized by sequence analysis of 16S rRNA gene libraries. Host-specific gene responses in gut ileal tissues to differences in microbial composition were investigated using Affymetrix microarray technology and Real-time PCR.

2009-12-01 | GSE15256 | GEO

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 1)

Project description:Campylobacter jejuni has become the predominant cause of sheep abortions in the U.S. However, little is know about the genetic diversity among the isolates collected from different time periods. In this study, the genetic diversity of sheep abortion isolates of C. jejuni was investigated by Array-based CGH

2014-02-11 | GSE54858 | GEO

Array-based comparative genomics of Campylobacter jejuni sheep abortion isolates (Part 2)

Project description:Campylobacter jejuni has become the predominant cause of sheep abortions in the U.S. However, little is know about the genetic diversity among the isolates collected from different time periods. In this study, the genetic diversity of sheep aborion isolates of C. jejuni was investigated by Array-based CGH

2014-02-11 | GSE54859 | GEO

Does an immune response at the Ileum contribute to severity and development of helminth-diarrhoea in Merino sheep (ileum)?

Project description:Purpose: To investigaet whether an inflammatory immune response at the Ileum can contribute to development and severity of diarrhoea in Merino sheep that are prone and not prone to develop diarrhoea. Methods:Transcriptomes in the Ileum (third part of small intestine) of Merino sheep were analyzed using RNASeq. Functional enrichment of DEGs using GO terms in biological processes and KEGG pathways were studied. PPI (protein-protein interaction) network and sub-network were studied using clusterONE plugin in Cytoscape. Result and conclusion: Although Ileum in not a primary site of helminth (species under study in our experiment), the results indicated that an inflammatory immune response can contribute to development and severity of diarrhoea. The low-diarrhoea animals did not show any signs of immune/inflammatory response. The genes with important roles in the responses to helminth infection could be targeted in breeding programs to prevent diarrhoea.

2022-06-27 | GSE179149 | GEO

RNA seq of ventral rumen wall of Australian sheep

Project description:Experiment to understand relationships between sheep rumen wall transcriptome and microbial methane emissions

2017-12-30 | GSE81847 | GEO

Chimonobambusa hejiangensis

Project description:Metabonomics and transcriptome Studies of Chimonobambusa hejiangensis

| PRJNA1057484 | ENA