Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Post-transcriptional control of mating-type gene expression during gametogenesis in Saccharomyces cerevisiae

ABSTRACT: Post-transcriptional control of mating-type gene expression during gametogenesis in Saccharomyces cerevisiae

PROVIDER: PRJNA747046 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15168727_1.fastq.gz	Fastqsanger.gz
	SRR15168727_2.fastq.gz	Fastqsanger.gz
	SRR15168728_1.fastq.gz	Fastqsanger.gz
	SRR15168728_2.fastq.gz	Fastqsanger.gz
	SRR15168729_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Post-transcriptional control of mating-type gene expression during gametogenesis in Saccharomyces cerevisiae

Project description:Short-read RNA-seq was performed on rRNA-depleted RNA isolated from spores of the budding yeast Saccharomyces cerevisiae that were sorted by mating type.

2021-08-17 | GSE180221 | GEO

Post-Transcriptional Control of Mating-Type Gene Expression during Gametogenesis in Saccharomyces cerevisiae.

Project description:Gametogenesis in diploid cells of the budding yeast Saccharomyces cerevisiae produces four haploid meiotic products called spores. Spores are dormant until nutrients trigger germination, when they bud asexually or mate to return to the diploid state. Each sporulating diploid produces a mix of spores of two haploid mating types, a and α. In asexually dividing haploids, the mating types result from distinct, mutually exclusive gene expression programs responsible for production of mating pheromones and the receptors to sense them, all of which are silent in diploids. It was assumed that spores only transcribe haploid- and mating-type-specific genes upon germination. We find that dormant spores of each mating type harbor transcripts representing all these genes, with the exception of Mata1, which we found to be enriched in a spores. Mata1 transcripts, from a rare yeast gene with two introns, were mostly unspliced. If the retained introns reflect tethering to the MATa locus, this could provide a mechanism for biased inheritance. Translation of pheromones and receptors were repressed at least until germination. We find antisense transcripts to many mating genes that may be responsible. These findings add to the growing number of examples of post-transcriptional regulation of gene expression during gametogenesis.

| S-EPMC8394074 | biostudies-literature

Expression data from Saccharomyces cerevisiae

Project description:Saccharomyces cerevisiae is an excellent microorganism for industrial succinic acid production, but high succinic acid concentration will inhibit the growth of Saccharomyces cerevisiae then reduce the production of succinic acid. Through analysis the transcriptomic data of Saccharomyces cerevisiae with different genetic backgrounds under different succinic acid stress, we hope to find the response mechanism of Saccharomyces cerevisiae to succinic acid.

2022-01-09 | GSE193190 | GEO

Proteome of saccharomyces cerevisiae

Project description:LPS was used as a stressor to stimulate the model organism Saccharomyces cerevisiae. To detect extracellular metabolic information of VOCs. To provide a molecular basis for cellular metabolism of VOCs by proteome.

2023-12-18 | PXD047920 |

Expression data from Saccharomyces cerevisiae

Project description:Industrial bioethanol production may involve a low pH environment,improving the tolerance of S. cerevisiae to a low pH environment caused by inorganic acids may be of industrial importance to control bacterial contamination, increase ethanol yield and reduce production cost. Through analysis the transcriptomic data of Saccharomyces cerevisiae with different ploidy under low pH stress, we hope to find the tolerance mechanism of Saccharomyces cerevisiae to low pH.

2022-12-09 | GSE210964 | GEO

Mating response of three yeast species (S. cerevisiae, S. paradoxus and S. mikatae)

Project description:We examined the mating response of three yeast species, by subjecting a-type cells from each of them to alpha-factor (6uM). The expression of cells before and after (60min) addition of alpha-factor were compared using S. cerevisiae cDNA microarrays. In addition, we verified our results with a true mating experiment: the expression of a-type and alpha-type cells from S. cerevisiae were compared before and after mixing them for 90 minutes (i.e. allowing them to mate). Keywords: yeast mating response, comparison among species

2007-05-20 | GSE7525 | GEO

MCT1 deletion in Saccharomyces cerevisiae

Project description:MCT1 was deleted in Saccharomyces cerevisiae and gene expression was measured over a timecourse.

2020-06-02 | GSE151606 | GEO

CGH of natural Saccharomyces cerevisiae strains

Project description:Comparative Genomic Hybridization of natural Saccharomyces cerevisiae strains vs lab reference strains.

2020-12-31 | GSE136466 | GEO

Saccharomyces cerevisiae

Project description:Saccharomyces cerevisiae

| PRJNA931438 | ENA

Array competitive genomic hybridization of three Saccharomyces cerevisiae strains vs. DBY8268

Project description:A six array study using total gDNA recovered from two separate cultures of each of three different strains of Saccharomyces cerevisiae (YB-210 or CRB, Y389 or MUSH, and Y2209 or LEP) and two separate cultures of Saccharomyces cerevisiae DBY8268. Each array measures the hybridization of probes tiled across the Saccharomyces cerevisiae genome.

2014-10-01 | GSE56441 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data