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Cupriavidus metallidurans CH34

ABSTRACT: Cupriavidus metallidurans CH34 Transcriptome or Gene expression

PROVIDER: PRJNA753702 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR15424912.fastq.gz	Fastqsanger.gz
	SRR15424913.fastq.gz	Fastqsanger.gz
	SRR15424914.fastq.gz	Fastqsanger.gz
	SRR27829612.fastq.gz	Fastqsanger.gz
	SRR27829613.fastq.gz	Fastqsanger.gz

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Metal resistant bacterium Cupriavidus metallidurans CH34

2014-09-13 | GSE24094 | GEO

Response of Cupriavidus metallidurans CH34 to different Pt-species

Project description:Response of Cupriavidus metallidurans CH34 to cisplatin, Pt(IV)chloride and Au-NP

2016-02-27 | GSE78723 | GEO

Response of Cupriavidus metallidurans CH34 to different Au-species

Project description:Response of Cupriavidus metallidurans CH34 to NaAuCl4, Au(I)-thiomalate, Au(I)-thiosulfate, KAuCN, (KCN as control)

2013-03-15 | GSE42199 | GEO

Metal resistant bacterium Cupriavidus metallidurans CH34

Project description:Metal resistant bacterium Cupriavidus metallidurans CH34 uses non-conventional proteins to combat oxidative stress Keywords: Cupriavidus metallidurans; hydrogen peroxide; oxidative stress; Two-condition experiments. Comparing samples after challenging with oxidative stress versus non-induced samples. Biological triplicate. Each array contains 3 technical replicates.

2014-09-13 | E-GEOD-24094 | biostudies-arrayexpress

Response of Cupriavidus metallidurans CH34 to different Pt-species

Project description:Response of Cupriavidus metallidurans CH34 to cisplatin, Pt(IV)chloride and Au-NP In this study 7 different treatments were performed (first 2 as 3 replicates) to acquire expression profiles of the total genome of Cupriavidus metallidurans

2016-02-27 | E-GEOD-78723 | biostudies-arrayexpress

Response of Cupriavidus metallidurans CH34 to different Au-species

Project description:Response of Cupriavidus metallidurans CH34 to NaAuCl4, Au(I)-thiomalate, Au(I)-thiosulfate, KAuCN, (KCN as control) In this study 10 different treatments were performed (first 7 as 3 replicates) to acquire expression profiles of the total genome of Cupriavidus metallidurans

2013-03-15 | E-GEOD-42199 | biostudies-arrayexpress

Expression analysis of Cupriavidus metallidurans CH34 in presence of heavy metals

Project description:Cupriavidus metallidurans CH34 is a metal resistant beta-proteobacterium. The genome of this bacterium contain many genes involved in heavy metal resistance. Gene expression of C. metallidurans was studied after the addition of of Zn(II), Cd(II), Cu(II), Ni(II), Pb(II), Hg(II) or Co(II). Keywords: Heavy metal stress response

2007-03-16 | GSE7272 | GEO

Cupriavidus metallidurans CH34

Project description:Cupriavidus metallidurans CH34 Raw sequence reads

| PRJNA486242 | ENA

Cupriavidus metallidurans CH34

Project description:Metal resistant bacterium Cupriavidus metallidurans CH34

| PRJNA130227 | ENA

Heavy metal resistance in Cupriavidus metallidurans CH34 is governed by an intricate transcriptional network

Project description:Background: The high number of heavy metal resistance genes in the soil bacterium Cupriavidus metallidurans CH34 makes it an interesting model organism to study microbial responses to heavy metals. Results: In this study the transcriptional response of this bacterium was measured after challenging it to a wide range of sub-lethal concentrations of various essential or toxic metals. Considering the global transcriptional responses for each challenge as well as by identifying the overlap in upregulated genes between different metal responses, the sixteen metals could be clustered in three different groups. Additionally, next to the assessment of the transcriptional response of already known metal resistance genes, new metal response gene clusters were identified. The majority of the metal response loci showed similar expression profiles when cells were exposed to different metals, suggesting complex cross-talk at transcriptional level between the different metal responses. The highly redundant nature of these metal resistant regions – illustrated by the large number of paralogous genes – combined with the phylogenetic distribution of these metal response regions within evolutionary related and other metal resistant bacteria, provides important insights on the recent evolution of this naturally soil dwelling bacterium towards a highly metal-resistant strain found in harsh and anthropogenic environments. Conclusions: The metal-resistant soil bacterium Cupriavidus metallidurans CH34 displays myriads of gene expression patterns when exposed to a wide range of heavy metals at non-lethal concentrations. The interplay between the different gene expression clusters points towards a complex cross-regulated regulatory network governing heavy metal resistance in C. metallidurans CH34. Keywords: Cupriavidus metallidurans CH34, transcriptional regulation, heavy metal resistance

2011-06-28 | GSE23876 | GEO

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