Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Comparison of tumor microenvironment of murine lung cancer ASB-XIV and LLC1.

ABSTRACT: Comparison of tumor microenvironment of murine lung cancer ASB-XIV and LLC1.

PROVIDER: PRJNA759882 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15702200_1.fastq.gz	Fastqsanger.gz
	SRR15702200_2.fastq.gz	Fastqsanger.gz
	SRR15702201_1.fastq.gz	Fastqsanger.gz
	SRR15702201_2.fastq.gz	Fastqsanger.gz
	SRR15702202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Comparison of tumor microenvironment of murine lung cancer ASB-XIV and LLC1.

Project description:Murine lung cancer cell lines, ASB-XIV and LLC1 are sensitive and resistant to immune checkpoint blockade, respectively. To compare their tumor microenvironment, we performed RNA-Seq analysis.

2021-11-01 | GSE183283 | GEO

Single-cell RNA-sequencing of tumor-infiltrating cells from intra-tibial injection of LLC1 cells in murine model.

Project description:We injected LLC1 cells into tibia to construct a murine model to study bone microenvironment in cancer bone metastasis. We used single cell RNA sequencing (scRNA-seq) to analyze the cellular heterogeneity of tumor-infiltrating cells.

2024-01-01 | GSE228609 | GEO

Project description:Whole exome sequencing of murine lung cancer cell lines, LLC1 and ASB-XIV

| PRJNA758177 | ENA

Single-cell RNA-sequencing of osteocyte-derived mitochondria recipient cells in the intra-tibial injection of LLC1 cells murine model.

Project description:LLC1 cells were injected into the tibia of DMP1-Cre PhAM mice to study the intercellular mitochondrial transfer in the bone microenvironment. We used single-cell RNA sequencing (scRNA-seq) to analyze the cellular heterogeneity of osteocyte-derived mitochondria recipient cells.

2024-01-01 | GSE228613 | GEO

Analysis by Whole Transcriptome Sequencing of the Effects of LLC1 conditioned medium, LLC1 conditioned plus Calcitriol, non-conditioned medium, and non-conditioned medium plus Calcitriol on mRNA Expression in Primary Human Skeletal Muscle Cells

Project description:Primary human skeletal muscle cells (Lonza) were treated with LLC1 conditioned medium, LLC1 conditioned medium plus Calcitriol, LLC1 non-conditioned medium or LLC1 non-conditioned medium plus Calcitriol for a period of 24 hours prior to isolation of RNA.

2018-02-07 | GSE103549 | GEO

Extra deep sequencing of GL261 and LLC1 murine cell lines for the purpose of fusion detection

Project description:RNA from GL261 (glioma) and LLC1 (Lewis Lung carcinoma) samples were sequenced at a depth of 142M and 188M paired reads, respectively.

2019-01-23 | GSE97975 | GEO

Analysis of mRNA Expression in Lewis Lung Carcinoma (LLC1) Cells and MLE 12 cells

Project description:Whole transcriptome sequencing was used to analyze mRNAs expressed by LLC1 and MLE 12 cells.

2018-02-07 | GSE103548 | GEO

Skeletal muscle RNA expression following implantation of LLC1 cells in mice

Project description:7- week old male and female, C57BL6 mice received subcutaneous injections of LLC1 lung adenocarcinoma cells or vehicle. Three weeks later, the mice were sacrificed and skeletal muscle was obtained for RNA-seq analysis.

2020-09-29 | GSE152553 | GEO

Comparison of primary vs immortalized murine hepatocytes

Project description:Comparison of primary vs immortalized murine hepatocytes

| PRJNA432701 | ENA

miRNA expression profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellular matrix proteins

Project description:The extracellular matrix (ECM), as one of the key components of tumor microenvironment has a high impact on cancer development and highly influences tumor cell features. ECM contribute not only structural support to growing tumor cells, but also affect other cellular functions such as cell differentiation, migration, survival or proliferation. Moreover, gene and protein expression levels are regulated in cell-ECM interaction dependent manner. MicroRNAs (miRNAs) act as key modulators of gene expression in various basic cellular processes where they can decrease protein synthesis through translational repression or RNA degradation. Despite miRNAs have recently emerged as important players involved in regulation of cell-ECM interactions molecular mechanisms of this phenomenon remains to be elucidated. To address this question we explored miRNA expression patterns in mouse Lewis lung carcinoma LLC1 cells growing in laminin rich ECM microenvironment. Total RNA enriched in small noncoding RNAs was isolated 48h after growing in two different cell culture systems

2015-12-10 | E-GEOD-75862 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data