Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transgenic Arabidopsis RNA-Seq

PROVIDER: PRJNA762981 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15882133.fastq.gz	Fastqsanger.gz
	SRR15882134.fastq.gz	Fastqsanger.gz
	SRR15882135.fastq.gz	Fastqsanger.gz
	SRR15882136.fastq.gz	Fastqsanger.gz
	SRR15882137.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Project description:RLK Arabidopsis transgenic RNA-Seq

| PRJNA739633 | ENA

Project description:RNA-seq data of GmGIF5 transgenic Arabidopsis

| PRJNA1121023 | ENA

Project description:NahG-transgenic Arabidopsis RNA sequencing

| PRJNA1207235 | ENA

Project description:RNA-Seq of WT, mutant and transgenic Arabidopsis plants

| PRJNA395645 | ENA

The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis

Project description:In this project, we profiled the dynamics of proteome during Arabidopsis early embryogenesis using nanoproteomics. In addition, we identified some proteins which may be important during this process. Combining with RNA-seq, we unveiled the relationship between RNA and proteins during Arabidopsis early embryogenesis.

2022-09-07 | PXD031922 | Pride

Project description:RNA-seq analysis of SA-hyperaccumulating Fd-Irp9 transgenic Arabidopsis

| PRJNA939115 | ENA

Project description:ChIP-Seq of transgenic Arabidopsis Thaliana

| PRJNA947075 | ENA

Role of CHR4 during floral transition

Project description:Several pathways conferring environmental flowering responses in Arabidopsis converge on developmental processes that mediate floral transition in the shoot apical meristem. Many characterized mutations disrupt these environmental responses, but downstream developmental processes have been more refractory to mutagenesis. We constructed a quintuple mutant impaired in several environmental pathways and showed that it possesses severely reduced flowering responses to changes in photoperiod and ambient temperature. RNA-seq analysis of the quintuple mutant showed that the expression of genes encoding gibberellin biosynthesis enzymes and transcription factors involved in the age pathway correlates with flowering. Mutagenesis of the quintuple mutant generated two late-flowering mutants, quintuple ems 1 (qem1) and qem2. The mutated genes were identified by isogenic mapping and transgenic complementation. The qem1 mutant was an allele of ga20ox2, confirming the importance of gibberellin for flowering in the absence of environmental responses. By contrast, the qem2 mutation is in CHROMATIN REMODELING 4 (CHR4), which has not been genetically implicated in floral induction. Using co-immunoprecipitation, RNA-seq and ChIP-seq, we show that CHR4 interacts with transcription factors involved in floral meristem identity and affects expression of key floral regulators. We conclude that CHR4 mediates the response to endogenous flowering pathways in the inflorescence meristem to promote floral identity.

2020-03-02 | PXD016457 | Pride

Transcriptome analysis of wild-type and VaWRKY14 overexpressing Arabidopsis

Project description:To investigate the downstream genes of VaWRKY14 during drought stress response in Arabidopsis, RNA-Seq was carried out on two biological replicates of wild-type and 3 transgenic Arabidopsis lines mixture under normal and drought treatment conditions

2018-12-01 | GSE108610 | GEO

Project description:Chrysanthemum transgenic RNA-Seq

| PRJNA1090155 | ENA