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Whole transcriptome profiling of H37Rv- and H37Rv△1759c-infected macrophages.

ABSTRACT: Whole transcriptome profiling of H37Rv- and H37Rv△1759c-infected macrophages.

PROVIDER: PRJNA765598 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR16021464.fastq.gz	Fastqsanger.gz
	SRR16021466.fastq.gz	Fastqsanger.gz
	SRR16021468.fastq.gz	Fastqsanger.gz
	SRR16021470.fastq.gz	Fastqsanger.gz
	SRR16021472.fastq.gz	Fastqsanger.gz

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Whole transcriptome profiling of H37Rv- and H37Rv△1759c-infected macrophages.

Project description:To explore the regulatory network of noncoding RNAs after M.tb infection and the role of Rv1759c in the infection process, we collected samples of H37Rv- and H37Rv△1759c-infected macrophages and explored the full transcriptome expression profile. We constructed DE-lncRNA/DE-circRNA-DE-miRNA-DE-mRNA regulatory networks during H37Rv and H37Rv△1759c infection. In addition, we first discovered the close relationship between Rv1759c and chemokines during M.tb infection by comparing the transcription profiles of H37Rv and H37Rv△1759c and bioinformatics analysis. Here, our study comprehensively characterizes the ncRNA and mRNA profiles in macrophages infected with H37Rv and H37Rv△1759c, which provides support and new directions for in-depth exploration of ncRNA and PE/PPE family functions during the infection process.

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