Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression difference of plasma microRNAs between colon adenocarcinoma with or without liver metastasis

ABSTRACT: Expression difference of plasma microRNAs between colon adenocarcinoma with or without liver metastasis

PROVIDER: PRJNA765609 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16022061.fastq.gz	Fastqsanger.gz
	SRR16022062.fastq.gz	Fastqsanger.gz
	SRR16022063.fastq.gz	Fastqsanger.gz
	SRR16022064.fastq.gz	Fastqsanger.gz
	SRR16022065.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Expression difference of plasma microRNAs between colon adenocarcinoma with or without liver metastasis

Project description:Plasma from a cohort of 6 patients diagnosed with colon adenocarcinoma (3 with hepatic metastasis and 3 without) was selected to identify expression profiles by microRNAs high-throughput RNA-seq analysis. The purpose of this study was to detect the differences in miRNA expression profile of COAD patients with or without liver metastasis, and to explore the potential targets for diagnosis or treatment.

2021-09-30 | GSE184669 | GEO

Expression Profiling of MicroRNAs in Relation to EGFR Mutation status in Japanese Smoker Male with Lung Adenocarcinoma [blood plasma]

Project description:The lung adenocarcinoma has an increased incidence in smokers. The molecular target therapy has been developed for lung adenocarcinoma patients harboring EGFR gene mutation. However, the treatment options for the patients without mutation are currently limited. Thus, analysis of EGFR gene mutation status at early stage is important strategy to classify patients for effective treatments and improving prognosis. This study aimed to identify microRNA (miRNAs) signature in relation to mutation status in EGFR gene in early stage of lung adenocarcinoma male patients with smoking history. MiRNA profiles were assessed by microarray in paired plasma and tissue pooled from 10 EGFR wild type (EGFR-wt) and 10 EGFR mutated (EGFR-mut) patients.

2018-02-14 | GSE102222 | GEO

Difference of gene expression between colorectal tumor tissues with and without metastasis

Project description:To identify the difference of genes expression bewteen colorectal tumor tissues with and without metastasis

2019-12-31 | GSE109910 | GEO

Exploring differentially expressed miRNAs (DEmiRNAs) in plasma sample between lung adenocarcinoma patients and healthy people

Project description:Exploring differentially expressed miRNAs (DEmiRNAs) in plasma sample between lung adenocarcinoma patients and healthy people using a small RNA (sRNA) sequencing,results showed that we could used these DEmiRNAs identified could discriminate healthy peoples from lung adenocarcinoma patients. In present study, we applied an RNA sequencing (RNA-seq) approach to explore the differentially expressed miRNAs (DEmiRNAs) in plasma sample between 6 lung adenocarcinoma patients and 4 healthy people.

2021-03-09 | GSE151963 | GEO

CircRNA expression profiling in plasma of early-stage lung adenocarcinoma patients and healthy controls

Project description:This study aimed to explore circRNA expression profiles in the plasma of patients with early-stage lung adenocarcinoma compared to healthy controls. Using Agilent microarray technology, we profiled total RNA extracted from plasma samples of 4 patients with early-stage lung adenocarcinoma (stages IA–IIA) and 4 healthy individuals. All subjects provided peripheral blood samples, and cell-free RNA was isolated from plasma. The objective was to identify potential circRNA biomarkers that could distinguish lung cancer patients from healthy individuals at early stages.

2025-05-12 | GSE296415 | GEO

Profiling of circulating microRNAs in patients with Barrettâ??s esophagus and esophageal adenocarcinoma

Project description:miRNAs were extracted from plasma samples of healthy volunteers, patients with Barrettâ??s esophagus and patients with esophageal adenocarcinoma. We used the Serum / Plasma Focus miRNA PCR panel (Exiqon, Denmark) to quantitate miRNA presence in the different patient groups. PCR miRNA profiling. miRNA from three different patient groups were extracted from their plasma.

2015-11-19 | E-GEOD-51410 | biostudies-arrayexpress

Profiling of circulating microRNAs in patients with Barrett’s esophagus and esophageal adenocarcinoma

Project description:miRNAs were extracted from plasma samples of healthy volunteers, patients with Barrett’s esophagus and patients with esophageal adenocarcinoma. We used the Serum / Plasma Focus miRNA PCR panel (Exiqon, Denmark) to quantitate miRNA presence in the different patient groups.

2015-11-19 | GSE51410 | GEO

cfDNA methylation data of longitudinally collected blood plasma samples from patients with esophageal adenocarcinoma

Project description:This study aimed to evaluate the cost-effective and genome-wide cell-free reduced representation bisulfite sequencing (cfRRBS) method combined with computational deconvolution for effective disease monitoring in patients with esophageal adenocarcinoma (EAC). cfDNA methylation profiling with cfRRBS was performed on 162 blood plasma samples from 33 EAC cancer patients and 28 blood plasma samples from 20 healthy donors. In addition, for reproducibility testing purposes of the method, 9 plasma samples were re-prepped (library was re-made) and re-sequenced once (n=9) or twice (n=1). As a reference for the data deconvolution cfRRBS was performed on 7 EAC tumor tissue (FFPE) samples.

2024-12-04 | E-MTAB-14370 | biostudies-arrayexpress

Difference of gene expression between colorectal tumor tissues with and without metastasis

Project description:Difference of gene expression between colorectal tumor tissues with and without metastasis

| PRJNA432332 | ENA

Difference between sulforaphane and sulforaphene in colon cancer

Project description:Difference between sulforaphane and sulforaphene in colon cancer

| PRJNA729976 | ENA