Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lactobacillales

ABSTRACT: Lactobacillales strains with antifungal acitivity Genome sequencing and assembly

PROVIDER: PRJNA766081 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR27298756_1.fastq.gz	Fastqsanger.gz
	SRR27298757_1.fastq.gz	Fastqsanger.gz
	SRR27298758_1.fastq.gz	Fastqsanger.gz
	SRR27298759_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 19

Similar Datasets

Lactobacillales bacterium strain:NIBRBAC000499792

Project description:Lactobacillales bacterium strain:NIBRBAC000499792 Genome sequencing

| PRJNA416054 | ENA

Genome Sequence of Enterobacterales, Bacillales and Lactobacillales strains.

Project description:Genome Sequence of Enterobacterales, Bacillales and Lactobacillales strains.

| PRJEB50159 | ENA

uncultured Lactobacillales bacterium

Project description:Lactobacillales identification by 16S rRNA partial gene sequencing

| PRJNA430022 | ENA

Lactobacillales

Project description:Genome sequencing and assembly of five Lactobacillaes species

| PRJNA785875 | ENA

Lactobacillales

Project description:Lactic acid bacteria Genome sequencing

| PRJNA260124 | ENA

Lactobacillales

Project description:Genome analysis of plant-derived lactic acid bacteria

| PRJDB8488 | ENA

RNA sequencing of the treatment of Aspergillus fumigatus with the new antifungal drug 089 -SYBARIS

Project description:The mechanism of action of the new antifungal compound 089 was identified in Saccharomyces cerevisiae. The compound had antifungal effects also on pathogenic fungi. While on Candida species the treatment induced cells death, on A. fumigatus strains it inhibited the conidia transition to hyphae. We carried out RNA sequencing analysis to evaluate at the molecular level the effect of the treatment on Aspergillus.

2020-03-04 | E-MTAB-5309 | biostudies-arrayexpress

Lactobacillales

Project description:Genome Project of Lactic Acid Bacteria Beneficial for Fermentation of Rice Grain Silage

| PRJDB1101 | ENA

Mouse Segmental Duplication and Copy-Number Variation

Project description:Detailed analyses of the clone-based genome assembly reveal that the recent duplication content of mouse (4.94%) is now comparable to that of human (5.5%), in contrast to previous estimates from the whole-genome shotgun sequence assembly. The architecture of mouse and human genomes differ dramatically; most mouse duplications are organized into discrete clusters of tandem duplications that are depleted for genes/transcripts and enriched for LINE1 and LTR retroposons. We assessed copy-number variation of the C57BL/6J duplicated regions within 15 mouse strains used for genetic association studies, sequencing, and the mouse phenome project. We determined that over 60% of these basepairs are polymorphic between the strains (on average 20 Mbp of copy-number variable DNA between different mouse strains). Our data suggest that different mouse strains show comparable, if not greater, copy-number polymorphism when compared to human; however, such variation is more locally restricted. We show large and complex patterns of inter-strain copy-number variation restricted to large gene families associated with spermatogenesis, pregnancy, viviparity, phermone signaling, and immune response. Keywords: comparative genomic hybridization

2008-05-10 | GSE11369 | GEO

Antifungal drug responses in two Candida glabrata strains

Project description:Transcriptomic responses of Candida glabrata strains, BG2 and CBS138, to two azole antifungal drugs, Fluconazole and Voriconazole.

2025-07-29 | GSE273379 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data