Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Salix viminalis var. gmelinii

ABSTRACT: Salix viminalis var. gmelinii Genome sequencing and assembly

PROVIDER: PRJNA774245 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16582939_1.fastq.gz	Fastqsanger.gz
	SRR16582939_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Salix viminalis

Project description:Salix viminalis Map

| PRJNA72303 | ENA

Salix viminalis

Project description:Salix viminalis Organism overview

| PRJNA30545 | ENA

Salix viminalis cultivar:JORR

Project description:Salix viminalis JORR Assembly

| PRJNA892601 | ENA

Salix viminalis cultivar:07-MBG-5027

Project description:Salix viminalis 07-MBG-5027 Assembly

| PRJNA892600 | ENA

Larix gmelinii var. olgensis

Project description:Transcriptome assembly of Larix gmelinii var. olgensis

| PRJNA776766 | ENA

Impact of heavy metals on cold acclimation of Salix viminalis roots

Project description:Frost is a major abiotic stress limiting plant growth and development. Climate change models predict an increase in the magnitude and frequency of late-frost events, which, together with an observed loss of soil insulation, will significantly damage roots. To withstand freezing stress, plants have evolved an adaptative process known as cold acclimation. While this process is well documented, it is known that the plant response to multiple stresses is unique and cannot be deduced from the response to each stress taken separately. Here, we investigate the impact of long-term metal exposure on the cold acclimation of Salix viminalis roots. To do so, we used physiological, transcriptomic and proteomic approaches. We found that while metal exposure significantly affected plants morphology and physiology, it did not impede cold acclimation. The impact of the simultaneous exposure to metals and cold acclimation on the transcriptome was unique, while at the proteomic level, the cold acclimation component seemed to be dominant. Further analysis revealed that metals strongly and negatively impacted the cellular antioxidant system. While this should have led to a loss of frost tolerance, it was not observed. A group of proteins was identified that could have played a role in compensating the impediment of the antioxidative system in metal-exposed roots.

2024-02-14 | GSE218490 | GEO

Salix viminalis genomic sequencing

Project description:Salix viminalis genomic sequencing of 4 genotypes

| PRJEB15049 | ENA

Larix gmelinii var. olgensis

Project description:Larix gmelinii var. olgensis Raw sequence reads

| PRJNA544580 | ENA

Salix viminalis RNA sequencing

Project description:Salix viminalis RNA sequencing of 6 genotypes and 2 tissues

| PRJEB15050 | ENA

Larix gmelinii var. olgensis

Project description:Larix gmelinii var. olgensis Transcriptome or Gene expression