Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Mycorrhization of Urban Trees

PROVIDER: PRJNA774252 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16599951.fastq.gz	Fastqsanger.gz
	SRR16599952.fastq.gz	Fastqsanger.gz
	SRR16599953.fastq.gz	Fastqsanger.gz
	SRR16599954.fastq.gz	Fastqsanger.gz
	SRR16599955.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 88

Similar Datasets

Project description:Microbiomes of urban trees

| PRJNA1162784 | ENA

endophyte metagenome

Project description:Seasonal variation of bacterial endophytes in urban trees

| PRJNA277035 | ENA

Project description:Ectomycorrhizal fungal communities associated with urban Carpinus betulus trees

| PRJNA808645 | ENA

Urban waterways microbial communities (GeoChip)

Project description:The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this proect we study the influence of land use type and environmental parameters on the structure and function of microbial communities. The present study was conducted in an urban catchment, where the metal and pollutants levels are under allowable limits. The overall goal of this study is to understand the role of engineered physicochemical environment on the structure and function of microbial communities in urban storm-water canals.

2014-12-22 | GSE64286 | GEO

mRNA expression data from A549 exposed to fresh or aged urban air mixtures

Project description:We are investigating the mRNA expression profiles of human lung cells to gaseous urban mixtures We used microarrays to compare the global mRNA expression profiles upon response to fresh against aged urban mix Keywords: dose A549 cells were grown to confluency and exposed to fresh urban mix, aged urban mix, or mock-treated. RNA was collected 9 hrs after exposure.

2011-02-01 | E-GEOD-23735 | biostudies-arrayexpress

Urban waterways microbial communities (Affymetrix)

2014-12-22 | GSE64368 | GEO

High-resolution comparative genome hybridization survey of healthy individuals (chromosome 22)

Project description:HighRes-CGH arrays that utilize ≈385,000 distinct oligonucleotide probes to cover chromosome 22 at 85 bp resolution (tiling path step size) were designed and synthesized as previously described (Urban et al., Proc Natl Acad Sci U S A. 2006;103(12):4534-9; see also GSE4240 record). Here, two healthy individuals were studied using the same experimental protocols as in Urban et al. Keywords: high-resolution comparative genome hybridization using oligonucleotides

2006-10-12 | GSE6010 | GEO

mRNA expression data from A549 exposed to fresh or aged urban air mixtures

2011-02-01 | GSE23735 | GEO

Using Blood-Informative Transcripts in Geographical Genomics: Impact of Lifestyle on Gene Expression in Fijians

Project description:This study explores the impact of lifestyle and environment on gene expression through whole transcriptome profiling of peripheral blood samples in Fijian population (native Melanesians and Indians) living in the rural and urban areas. 41 individuals (14 urban Melanesians, 10 rural Melanesians and 17 urban Indians) of both gender were sampled under informed consents. Only healthy individuals aged between 18 and 65 were sampled. RNA from each sample was hybridized to an Illumina array. No replicates were done in this study

2012-12-31 | E-GEOD-41233 | biostudies-arrayexpress

Diet and multi-omics characterization in the Study of Urban and Rural Crohn Disease Evolution (SOURCE) cohort

Project description:The Study Of Urban and Rural Crohn disease Evolution (SOURCE, n=380) characterized exposures, diet, and host and microbial factors in rural and urban Chinese controls and newly diagnosed Crohn Disease (CD), and in treatment-naïve Israeli CD and controls. We considered diet-omics domains simultaneously to detect complex interactions in the gut to prioritize potential beneficial and pathogenic factors.

2024-02-15 | GSE233900 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data