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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation

ABSTRACT: The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation

PROVIDER: PRJNA792075 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR17327160.fastq.gz	Fastqsanger.gz
	SRR17327161.fastq.gz	Fastqsanger.gz
	SRR17327162.fastq.gz	Fastqsanger.gz
	SRR17327163.fastq.gz	Fastqsanger.gz
	SRR17327164.fastq.gz	Fastqsanger.gz

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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [I]

Project description:The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [I]

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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [II]

Project description:The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [II]

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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [II]

Project description:To screen the potential targets of Salmonella 3’ UTR derived sRNA FadZ, we compared global mRNA profiles in FadZ-deficient and -pulse expressed strains. The 40-nt FadZ sequences was cloned onto a plasmid downstream of the pBAD promoter and expression was induced by L-arabinose for 10-min in LB broth. Transcriptomic profiles were compared with strain carrying the empty control plasmid.

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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation [I]

Project description:To unfold the potential links between Salmonella fatty acid oxidation and other metabolic pathways, we performed RNA-seq to draw the transcriptomic response of Salmonella in response to oleci acid treatment. We compared samples of oleic acid shock (Group OAS) and oleic acid growth (Group OAG) to glucose growth (Group GLU).

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The short 3’ UTR derived sRNA FadZ buffers the transcriptional fluctuations during fatty acid oxidation

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