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Comparative assessment of the resilience capacity of different indigenous goat breeds to summer heat stress based on selective thermo-tolerant gene expression pattern

ABSTRACT: Comparative assessment of the resilience capacity of different indigenous goat breeds to summer heat stress based on selective thermo-tolerant gene expression pattern

PROVIDER: PRJNA795893 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR17521734_1.fastq.gz	Fastqsanger.gz
	SRR17521734_2.fastq.gz	Fastqsanger.gz
	SRR17521735_1.fastq.gz	Fastqsanger.gz
	SRR17521735_2.fastq.gz	Fastqsanger.gz
	SRR17521736_1.fastq.gz	Fastqsanger.gz

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Comparative assessment of the resilience capacity of different indigenous goat breeds to summer heat stress based on selective thermo-tolerant gene expression pattern

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Dataset of milk whey proteins of two indigenous greek goat breeds.

Project description:Due to its rarity and unique biological traits, as well as its growing financial value, milk of dairy Greek small ruminants is continuously attracting interest from both the scientific community and industry. For the construction of the present dataset, cutting-edge proteomics methodologies were employed, in order to investigate and characterize, for the first time, the milk whey proteome from the two indigenous Greek goat breeds, Capra prisca and Skopelos. In total 822 protein groups were identified in milk whey of the two breeds, The present data are further discussed in the research article "Milk of Greek sheep and goat breeds; characterization by means of proteomics" [1].

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Project description:BackgroundTo assess the genetic diversity of seven Yunnan indigenous goat populations (Fengqing hornless goat, Mile red-bone goat, Longling goat, Ninglang black goat, Black-bone goat, Yunling black goat, and Zhaotong goat), their population structures were investigated using 20 microsatellite markers.ResultsThe results indicated that the genetic diversity of these goats was rich. The observed heterozygosity ranged from 0.4667 ± 0.0243 to 0.5793 ± 0.0230, and the mean number of alleles ranged from 4.80 ± 1.61 and 4.80 ± 1.64 to 6.20 ± 2.93. The population structure analysis showed that these seven goat populations were separated into two clusters, consistent with the results from phylogenetic networks, pairwise differences, and STRUCTURE analyses. We speculate that this may have been caused by natural geographical isolation, human migration and economic and cultural exchanges. We suggest removing CSRD247 and ILSTS005, two loci identified to be under positive selection in the present study, from the microsatellite evaluation system of goats.ConclusionsThe present study may provide a scientific basis for the conservation and utilization of Yunnan indigenous goats.

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