Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome analysis of A549 cells upon LITATS1 knockdown

ABSTRACT: Transcriptome analysis of A549 cells upon LITATS1 knockdown

PROVIDER: PRJNA814810 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18296415.fastq.gz	Fastqsanger.gz
	SRR18296416.fastq.gz	Fastqsanger.gz
	SRR18296417.fastq.gz	Fastqsanger.gz
	SRR18296418.fastq.gz	Fastqsanger.gz
	SRR18296419.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Transcriptome analysis of U87 cells upon LINC00152 knockdown

Project description:Transcriptome analysis of U87 cells upon LINC00152 knockdown

| PRJNA437668 | ENA

Transcriptome analysis upon Hmg20a knockdown in astrocytes

Project description:Transcriptome analysis upon Hmg20a knockdown in astrocytes

| PRJNA677916 | ENA

Transcriptome analysis of A549 cells upon lncRNA ectopic LETS1 expression

Project description:Transcriptome analysis of A549 cells upon lncRNA ectopic LETS1 expression

| PRJNA838928 | ENA

Secretome analysis of HSPD1 knockdown in A549 lung cancer cells

Project description:HSPD1 knockdown was established in A549 cells using an shRNA approach. Secretomes from both shHSPD1-A549 and shControl-A549 cells were collected and subjected to label-free comparative proteome analysis using SWATH-MS.

2024-04-13 | PXD050755 | Pride

A549 MMAB knockdown

Project description:A549 MMAB knockdown

| PRJEB100796 | ENA

Transcriptomic analysis of RNases knockdown in A549 cells.

Project description:Transcriptomic analysis of RNases knockdown in A549 cells.

| PRJNA871880 | ENA

Transcriptome analysis of A549 cells upon LITATS1 knockdown

Project description:We identified a tumor-supressing long non-coding RNA (lncRNA) named lncRNA induced by TGF-beta and antagonizes TGF-beta signaling 1 (LITATS1). It was found to mitigate epithelial-to-mesenchymal transition (EMT), cell migration and extravasation in a zebrafish exnograft model. To better dissect the downstream target genes and elucidate the signaling pathways altered by LITATS1, we depleted LITATS1 by specific shRNAs in A549 cells. Total RNA was collected and sent for RNA sequencing analysis. Afterwards, differentially expressd genes were used for the pathway enrichment analysis and gene set enrichment analysis (GSEA).

2022-03-14 | GSE198393 | GEO

Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown

Project description:Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown

| PRJNA395374 | ENA

RNA-seq analysis of A549 cells based on DSTY knockdown

Project description:RNA-seq analysis of A549 cells based on DSTY knockdown

| PRJNA739201 | ENA

Transcriptome analysis upon Nipbl, Brd2 and Brd4 knockdown in P19 cells

Project description:Transcriptome analysis upon Nipbl, Brd2 and Brd4 knockdown in P19 cells

| PRJNA548966 | ENA