Project description:We report the trasncriptomic profile of Pinot Noir at ethylene peak. The main aim is to understand the effect of 1-MCP on gene transcription and during this ripening window.

2018-06-17 | GSE83494 | GEO

Project description:Leaf transcriptome of Pinot Noir at different leaf ages

| PRJNA798204 | ENA

Genome-wide analysis of the grapevine stilbene synthase multigenic family: genomic organization and expression profiles upon biotic and abiotic stresses

Project description:In this study a complete characterization of the STS multigenic family in grapevine has been performed, commencing with the identification, annotation and phylogenetic analysis of all members and integration of this information with a comprehensive set of gene expression analyses including healthy tissues at differential developmental stages and in leaves exposed to both biotic (downy mildew infection) and abiotic (wounding and UV-C exposure) stresses. At least thirty-three full length sequences encoding VvSTS genes were identified, which, based on predicted amino acid sequences, cluster in 3 principal subgroups designated A, B and C. The majority of VvSTS genes cluster in subgroups B and C and are located on chr16 whereas the few gene family members in subgroup A are found on chr10. Microarray and mRNA-seq expression analyses revealed different patterns of transcript accumulation between the different groups of VvSTS family members and between VvSTSs and VvCHSs. Indeed, under certain conditions the transcriptional response of VvSTS and VvCHS genes appears to be diametrically opposed suggesting that flow of carbon between these two competing metabolic pathways is tightly regulated at the transcriptional level. Examination of transcriptome profile in Vitis vinifera cv Pinot noir leaf discs pools trated upon biotic and abiotic stresses. 7 samples examined: Control (=wounded 0h), wounded 24h, wounded 48h, UV-C treated 24h, UV-C treated 48h, Plasmopara viticola infected 24h, Plasmopara viticola infected 48h.

2012-05-21 | E-GEOD-37743 | biostudies-arrayexpress

Vitis vinifera

Project description:Pinot Noir berry transcriptome during ripening.

| PRJNA145369 | ENA

Vitis vinifera

Project description:Pinot Noir RNA-seq

| PRJNA837346 | ENA

Pinot Noir berry transcriptome during ripening.

Project description:Global gene expression analysis of grapevine cv. Pinot Noir berries during development and ripening. Time-course comparison of samples collected at three developmental stages (stages 33, 34 and 36 according to the modified E-L system, ref: Coombe BG, Aust J Grape Wine Res 1995, 1: 104-110) during three seasons (2003, 2005 and 2006). Data for each of the three seasons were normalized independently within each season, using gcRMA. PLEXdb (http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Stefania Pilati. The equivalent experiment is VV11 at PLEXdb. year: 2003 - developmental stage: UD:0000034 33E-L (3-replications); year: 2003 - developmental stage: UD:0000035 34E-L (3-replications); year: 2003 - developmental stage: UD:0000037 36E-L (3-replications); year: 2005 - developmental stage: UD:0000034 33E-L (3-replications); year: 2005 - developmental stage: UD:0000035 34E-L (3-replications); year: 2005 - developmental stage: UD:0000037 36E-L (3-replications); year: 2006 - developmental stage: UD:0000034 33E-L (3-replications); year: 2006 - developmental stage: UD:0000035 34E-L (3-replications); year: 2006 - developmental stage: UD:0000037 36E-L (3-replications)

2011-08-26 | E-GEOD-31674 | biostudies-arrayexpress

Vitis vinifera cultivar:Pinot Noir

Project description:Vitis vinifera Pinot Noir Genome sequencing

| PRJNA951461 | ENA