ABSTRACT: nifH gene targeted bacterial community under 11 years old long term pesticide experiment (LTPE) in paddy soil (Under Institute project 3.5 Plant protection molecules: efficacy, distribution, toxicity and remediation)
Project description:De novo whole metagenome in 51 years old long term fertilized (LTFE) paddy soil (Under Institute project 2.1 Enhancing nutrient use efficiency in rice through advance agronomy using smart sensors, models and remediation)
Project description:De novo whole metagenome in 51 years old long term fertilized (LTFE) paddy soil (Under Institute project 2.1 Enhancing nutrient use efficiency in rice through advance agronomy using smart sensors, models and remediation)
Project description:We have previously demonstrated statistical modeling of gene expression under various environmental factors using field transcriptome data obtained from samples grown in a paddy field at Tsukuba, Japan. In this series of experiments, we would like to improve the models for practical use. In order to do that, we have done field transcriptome assay in seven paddy fields at different sites in Japan (or, Sappro, Furukawa, Toyama, Tsukuba, Takatsuki, Furukawa, and Fukuoka). This data is from one of the places, Toyama.
2017-03-31 | GSE65598 | GEO
Project description:Microbial composition, assembly, and functional characteristics of generalized and specialized subcommunities under flooded paddy fields: long-term pesticide versus non-pesticide models
| PRJNA1279369 | ENA
Project description:Microbial composition, assembly, and functional characteristics of generalized and specialized subcommunities under flooded paddy fields: long-term pesticide versus non-pesticide models
Project description:the original data of black soldier fly larva mass fermentation with Bacillus subtilis and Aspergillus niger, analyzed by Chinese biotechnology company, published by Chinese Academy of Tropical Agricultural Sciences Environment and Plant Protection Institute for research only.
Project description:Paddy rice with husk can be availbale for chicken dietary resource instead of yellow corn. Ingestion of paddy rice potentially affects on gastrointestinal physiology and function including digestion/absorption of nutrients and gut barrier function such as mucosal immunity, but the details of changes is unknown. To obtain insight into the physiological modifications in the small intestine of chickens fed paddy rice, we conducted a comprehensive analysis of gene expression in small intestine by DNA microarray. In the paddy rice group, a total of 120 genes were elevated >1.5-fold in the paddy rice group, whereas a total of 159 genes were diminished < 1.5-fold. Remarkably, the gene expression levels of IGHA (immunoglobulin heavy chain α), IGJ (immunoglobulin J chain), and IGLL1 (immunoglobulin light chain λ chain region), which constitute immunoglobulin A, decreased 3 to 10 times in the paddy rice group.
Project description:Macronutrients are pivotal elements for proper plant growth and development. We performed microarray analysis of rice leaves under nitrogen (N), phosphorus (P), and potassium (K) deficiency conditions in paddy field to obtain a global view of gene regulations associated with plant response to essential nutrients.
