Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptome analysis of wood and bark of Salix Babylonica

PROVIDER: PRJNA826685 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18749862_1.fastq.gz	Fastqsanger.gz
	SRR18749862_2.fastq.gz	Fastqsanger.gz
	SRR18749863_1.fastq.gz	Fastqsanger.gz
	SRR18749863_2.fastq.gz	Fastqsanger.gz
	SRR18749864_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Project description:Transcriptome Sequencing of Salix babylonica

| PRJNA436424 | ENA

Salix babylonica

Project description:Transcriptome Sequencing of Salix babylonica

| PRJNA230875 | ENA

Salix babylonica

Project description:Salix babylonica overview

| PRJNA231096 | ENA

Project description:Salix babylonica Assembly

| PRJNA1136511 | ENA

Salix babylonica

Project description:Salix babylonica Transcriptome or Gene expression

| PRJNA230751 | ENA

Analyses of long-term fungal degradation of spruce bark reveals varying potential for catabolism of polysaccharides and extractive compounds

Project description:The bark represents the outer protective layer of trees. It contains high concentrations of antimicrobial extractives, in addition to regular wood polymers. It represents a huge underutilized side stream in forestry, but biotechnological valorization is hampered by a lack of knowledge on microbial bark degradation. Many fungi are efficient lignocellulose degraders, and here, spruce bark degradation by five species, Dichomitus squalens, Rhodonia placenta, Penicillium crustosum, Trichoderma sp. B1, and Trichoderma reesei, was mapped, by continuously analyzing chemical changes in the bark over six months. The study reveals how fungi from different phyla degrade bark using diverse strategies, regarding both wood polymers and extractives, where toxic resin acids were degraded by Basidiomycetes but unmodified/tolerated by Ascomycetes. Proteome analyses of the white-rot D. squalens revealed several proteins, with both known and unknown functions, that were specifically upregulated during growth on bark. This knowledge can accelerate improved utilization of an abundant renewable resource.

2024-05-04 | PXD043339 | Pride

Salix babylonica

Project description:Salix babylonica Assembly haplotype b

| PRJNA1130087 | ENA

Project description:microRNA Sequencing of Salix babylonica

| PRJNA436457 | ENA

Salix babylonica

Project description:Salix babylonica Assembly haplotype a

| PRJNA1130085 | ENA

Project description:Salix alba x babylonica hybrids

| PRJNA1283918 | ENA