Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Knema furfuracea

ABSTRACT: Knema furfuracea Raw sequence reads

PROVIDER: PRJNA827617 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18788588_1.fastq.gz	Fastqsanger.gz
	SRR18788588_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Knema linifolia

Project description:Knema linifolia Raw sequence reads

| PRJNA827620 | ENA

Knema conferta

Project description:Knema conferta Raw sequence reads

| PRJNA827621 | ENA

Knema elegans

Project description:Knema elegans Raw sequence reads

| PRJNA827619 | ENA

Knema globularia

Project description:Knema globularia Raw sequence reads

| PRJNA827622 | ENA

Knema cinerea

Project description:Knema cinerea Genome sequencing

| PRJNA669913 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Quantitative profiling of differentially expressed miRNAs in siCTL- and siOASL-transfected HUVECs

Project description:Purpose: The goal of this study is to compare endothelial small RNA transcriptome to identify the target of OASL under basal or stimulated conditions by utilizing miRNA-seq. Methods: Endothelial miRNA profilies of siCTL or siOASL transfected HUVECs were generated by illumina sequencing method, in duplicate. After sequencing, the raw sequence reads are filtered based on quality. The adapter sequences are also trimmed off the raw sequence reads. rRNA removed reads are sequentially aligned to reference genome (GRCh38) and miRNA prediction is performed by miRDeep2. Results: We identified known miRNA in species (miRDeep2) in the HUVECs transfected with siCTL or siOASL. The expression profile of mature miRNA is used to analyze differentially expressed miRNA(DE miRNA). Conclusions: Our study represents the first analysis of endothelial miRNA profiles affected by OASL knockdown with biologic replicates.

2022-09-06 | GSE186354 | GEO

Sequencing of siRNA from soybean containing silencing vectors and empty vectors

Project description:A cDNA library was constructed by Novogene (CA, USA) using a Small RNA Sample Pre Kit, and Illumina sequencing was conducted according to company workflow, using 20 million reads. Raw data were filtered for quality as determined by reads with a quality score > 5, reads containing N < 10%, no 5' primer contaminants, and reads with a 3' primer and insert tag. The 3' primer sequence was trimmed and reads with a poly A/T/G/C were removed

2021-07-21 | GSE180131 | GEO

raw

Project description:Drosophila melanogaster raw, raw, is differentially expressed in 23 experiment(s);

| FBgn0003209 | ExpressionAtlas

raw

Project description:Drosophila melanogaster raw, raw, is expressed in 5 baseline experiment(s);

| FBgn0003209 | ExpressionAtlas