Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Porites astreoides

ABSTRACT: Porites astreoides Genome sequencing and assembly

PROVIDER: PRJNA834048 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19144700_1.fastq.gz	Fastqsanger.gz
	SRR19144700_2.fastq.gz	Fastqsanger.gz
	SRR19144701_1.fastq.gz	Fastqsanger.gz
	SRR19144701_2.fastq.gz	Fastqsanger.gz
	SRR19144702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Porites astreoides

Project description:Porites astreoides overview

| PRJNA339331 | ENA

Porites Astreoides

Project description:Porites Astreoides Raw sequence reads

| PRJNA300723 | ENA

Porites astreoides

Project description:Porites astreoides raw TagSeq reads

| PRJNA327141 | ENA

Porites astreoides

Project description:Porites astreoides larvae raw sequence reads and microarray

| PRJNA339243 | ENA

Porites astreoides

Project description:RNA-Seq reads of shallow and mesophotic adults and larvae of the coral Porites astreoides

| PRJNA842853 | ENA

Exposure to the Florida red tide dinoflagellate, Karenia brevis, and its associated brevetoxins induces ecophysiological and proteomic alterations in Porites astreoides

Project description:As reef-building corals are increasingly being exposed to persistent threats that operate on both regional and global scales there is a pressing need to better understand the complex processes that diminish coral populations. This study investigated the impacts of the Florida Red Tide dinoflagellate Karenia brevis and associated brevetoxins on selected facets of coral biology using Porites astreoides as a model system. When provided with choice assays, P. astreoides larvae were shown to actively avoid seawater containing red tide or purified brevetoxins. However, forced exposure to similar treatments induced time-dependent physiological and behavioral changes that were captured by PAM fluorometry and settlement and survival assays, respectively. Adult fragments of P. astreoides exposed to red tide or associated brevetoxins displayed signs of proteomic alterations that were characterized by use of an iTRAQ-based quantitative proteomic analysis. The novel use of this technique on P. astreoides demonstrated that protein expression was highly contingent upon biological versus chemical treatment and that several broad pathways associated with cell stress were affected including redox homeostasis, protein folding, energy metabolism, and reactive oxygen species (ROS) production. The results herein provide new insight into the ecology, behavior and sublethal stress of reef-building corals in response to K. brevis exposure and underscore the importance of recognizing the potential of red tide to act as a regional stressor to these important foundation species.

2019-10-08 | MSV000084432 | MassIVE

Porites lutea

Project description:Porites lutea Genome sequencing

| PRJNA305087 | ENA

Porites astreoides

Project description:A mechanistic understanding of calcification in Puerto Rican coral reefs

| PRJNA283441 | ENA

Porites astreoides

Project description:Environmental drivers of genetic adaptation in two coral species from Florida

| PRJNA812916 | ENA

Porites australiensis

Project description:Porites australiensis transcriptome assembly